CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM08G15970
(
Oryza glumaepatula
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
OGLUM08G15970
T221455_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM08G15970.3
Homeodomain
84
138
LEWGTDPLEVEALERVYTDCPKPISVHRQQLLCECPILANIEPKQIKVWFQNRGY
OGLUM08G15970.4
Homeodomain
67
116
SCKYVHYTPEQVEALERVYTDCPKPISVHRQQLLCECPILANIEPKQIKV
Links
Other
Homeodomain
family TFs
Other
Oryza glumaepatula
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc15006
Meloidogyne incognita
Minc15006
N
ACOC_0001033601
Angiostrongylus costaricensis
ACOC_0001033601
N
ANCCEY_04345
Ancylostoma ceylanicum
ANCCEY_04345
N
ANCDUO_25873
Ancylostoma duodenale
ANCDUO_25873
N
BXY_0071900
Bursaphelenchus xylophilus
BXY_0071900
N
DICVIV_06646
Dictyocaulus viviparus
DICVIV_06646
N
HCOI01069100
Haemonchus contortus
HCOI01069100
N
HCOI01070700
Haemonchus contortus
HCOI01070700
N
HCOI02188500
Haemonchus contortus
HCOI02188500
N
HPLM_0001019601
Haemonchus placei
HPLM_0001019601
N
maker-nMf.1.1.scaf00590-augustus-gene-0.15
Meloidogyne floridensis
maker-nMf.1.1.scaf00590-augustus-gene-0.15
N
MhA1_Contig527.frz3.gene2
Meloidogyne hapla
MhA1_Contig527.frz3.gene2
N
NBR_0001469201
Nippostrongylus brasiliensis
NBR_0001469201
N
NECAME_04309
Necator americanus
NECAME_04309
N