PGSC0003DMG402012439 (Solanum tuberosum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PGSC0003DMG402012439 T222232_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK20392.1
M01250_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11331 		0.667 0.596
PK20392.1
M01251_2.00 		Cannabis sativa
NHAATMATDN
NHATKATTDN		 PBM
Lambert et al.(2019)
pTH11332 		0.667 0.596
ATHB-20
M06912_2.00 		Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_col_a 		0.667 0.596
ATHB-20
M06913_2.00 		Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD		 Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a 		0.667 0.596
ATHB-22
M02041_2.00 		Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN		 PBM
Weirauch et al.(2014)
pTH5883 		0.624 0.491
ATHB-51
M00867_2.00 		Arabidopsis thaliana
ATWATKNN
NNMATWAT		 PBM
Franco-Zorrilla et al.(2014)
ATHB51 		0.615 0.544
ATHB-51
M06927_2.00 		Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH		 Dap-seq
OMalley et al.(2016)
LMI1_col_a 		0.615 0.544
ATHB-51
M06928_2.00 		Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN		 Dap-seq
OMalley et al.(2016)
LMI1_colamp_a 		0.615 0.544
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400032390 Homeodomain 15 71

Links

Other Homeodomain family TFs
Other Solanum tuberosum TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_008370 Trichomonas vaginalis TVAG_008370 I 0.000
TVAG_017810 Trichomonas vaginalis TVAG_017810 I 0.000
TVAG_030320 Trichomonas vaginalis TVAG_030320 I 0.000
TVAG_033530 Trichomonas vaginalis TVAG_033530 I 0.000
TVAG_034560 Trichomonas vaginalis TVAG_034560 I 0.000
TVAG_041220 Trichomonas vaginalis TVAG_041220 I 0.000
TVAG_048830 Trichomonas vaginalis TVAG_048830 I 0.000
TVAG_049600 Trichomonas vaginalis TVAG_049600 I 0.000
TVAG_050010 Trichomonas vaginalis TVAG_050010 I 0.000
TVAG_074130 Trichomonas vaginalis TVAG_074130 I 0.000
TVAG_085400 Trichomonas vaginalis TVAG_085400 I 0.000
TVAG_105110 Trichomonas vaginalis TVAG_105110 I 0.000
TVAG_106110 Trichomonas vaginalis TVAG_106110 I 0.000
TVAG_122130 Trichomonas vaginalis TVAG_122130 I 0.000
TVAG_138190 Trichomonas vaginalis TVAG_138190 I 0.000
TVAG_170760 Trichomonas vaginalis TVAG_170760 I 0.000
TVAG_170790 Trichomonas vaginalis TVAG_170790 I 0.000
TVAG_179440 Trichomonas vaginalis TVAG_179440 I 0.000
TVAG_187200 Trichomonas vaginalis TVAG_187200 I 0.000
TVAG_194980 Trichomonas vaginalis TVAG_194980 I 0.000
TVAG_200950 Trichomonas vaginalis TVAG_200950 I 0.000
TVAG_203550 Trichomonas vaginalis TVAG_203550 I 0.000
TVAG_208090 Trichomonas vaginalis TVAG_208090 I 0.000
TVAG_208170 Trichomonas vaginalis TVAG_208170 I 0.000
TVAG_213270 Trichomonas vaginalis TVAG_213270 I 0.000
TVAG_217510 Trichomonas vaginalis TVAG_217510 I 0.000
TVAG_218720 Trichomonas vaginalis TVAG_218720 I 0.000
TVAG_223440 Trichomonas vaginalis TVAG_223440 I 0.000
TVAG_236320 Trichomonas vaginalis TVAG_236320 I 0.000
TVAG_242410 Trichomonas vaginalis TVAG_242410 I 0.000
TVAG_243160 Trichomonas vaginalis TVAG_243160 I 0.000
TVAG_255490 Trichomonas vaginalis TVAG_255490 I 0.000
TVAG_258650 Trichomonas vaginalis TVAG_258650 I 0.000
TVAG_274390 Trichomonas vaginalis TVAG_274390 I 0.000
TVAG_281620 Trichomonas vaginalis TVAG_281620 I 0.000
TVAG_287290 Trichomonas vaginalis TVAG_287290 I 0.000
TVAG_287680 Trichomonas vaginalis TVAG_287680 I 0.000
TVAG_304110 Trichomonas vaginalis TVAG_304110 I 0.000
TVAG_312030 Trichomonas vaginalis TVAG_312030 I 0.000
TVAG_315670 Trichomonas vaginalis TVAG_315670 I 0.000
TVAG_315700 Trichomonas vaginalis TVAG_315700 I 0.000
TVAG_317360 Trichomonas vaginalis TVAG_317360 I 0.000
TVAG_318220 Trichomonas vaginalis TVAG_318220 I 0.000
TVAG_320670 Trichomonas vaginalis TVAG_320670 I 0.000
TVAG_333520 Trichomonas vaginalis TVAG_333520 I 0.000
TVAG_336250 Trichomonas vaginalis TVAG_336250 I 0.000
TVAG_347110 Trichomonas vaginalis TVAG_347110 I 0.000
TVAG_356580 Trichomonas vaginalis TVAG_356580 I 0.000
TVAG_358740 Trichomonas vaginalis TVAG_358740 I 0.000
TVAG_384340 Trichomonas vaginalis TVAG_384340 I 0.000
TVAG_384980 Trichomonas vaginalis TVAG_384980 I 0.000
TVAG_398170 Trichomonas vaginalis TVAG_398170 I 0.000
TVAG_407290 Trichomonas vaginalis TVAG_407290 I 0.000
TVAG_407860 Trichomonas vaginalis TVAG_407860 I 0.000
TVAG_418370 Trichomonas vaginalis TVAG_418370 I 0.000
TVAG_422850 Trichomonas vaginalis TVAG_422850 I 0.000
TVAG_428400 Trichomonas vaginalis TVAG_428400 I 0.000
TVAG_431290 Trichomonas vaginalis TVAG_431290 I 0.000
TVAG_446510 Trichomonas vaginalis TVAG_446510 I 0.000
TVAG_448590 Trichomonas vaginalis TVAG_448590 I 0.000
TVAG_464320 Trichomonas vaginalis TVAG_464320 I 0.000
TVAG_466400 Trichomonas vaginalis TVAG_466400 I 0.000
TVAG_469670 Trichomonas vaginalis TVAG_469670 I 0.000
TVAG_471660 Trichomonas vaginalis TVAG_471660 I 0.000
TVAG_474270 Trichomonas vaginalis TVAG_474270 I 0.000
TVAG_481770 Trichomonas vaginalis TVAG_481770 I 0.000
TVAG_485740 Trichomonas vaginalis TVAG_485740 I 0.000
TVAG_490690 Trichomonas vaginalis TVAG_490690 I 0.000
TVAG_492320 Trichomonas vaginalis TVAG_492320 I 0.000
TVAG_500220 Trichomonas vaginalis TVAG_500220 I 0.000
TVAG_511900 Trichomonas vaginalis TVAG_511900 I 0.000
TVAG_514140 Trichomonas vaginalis TVAG_514140 I 0.000
TVAG_518010 Trichomonas vaginalis TVAG_518010 I 0.000
TVAG_518770 Trichomonas vaginalis TVAG_518770 I 0.000
TVAG_525230 Trichomonas vaginalis TVAG_525230 I 0.000
TVAG_528950 Trichomonas vaginalis TVAG_528950 I 0.000
TVAG_535080 Trichomonas vaginalis TVAG_535080 I 0.000
TVAG_535180 Trichomonas vaginalis TVAG_535180 I 0.000
TVAG_547380 Trichomonas vaginalis TVAG_547380 I 0.000
TVAG_551090 Trichomonas vaginalis TVAG_551090 I 0.000
TVAG_552810 Trichomonas vaginalis TVAG_552810 I 0.000
TVAG_555690 Trichomonas vaginalis TVAG_555690 I 0.000
TVAG_556150 Trichomonas vaginalis TVAG_556150 I 0.000
TVAG_563060 Trichomonas vaginalis TVAG_563060 I 0.000
TVAG_563360 Trichomonas vaginalis TVAG_563360 I 0.000
TVAG_566490 Trichomonas vaginalis TVAG_566490 I 0.000
TVAG_568980 Trichomonas vaginalis TVAG_568980 I 0.000
TVAG_578750 Trichomonas vaginalis TVAG_578750 I 0.000
TVAG_579860 Trichomonas vaginalis TVAG_579860 I 0.000
TVAG_590210 Trichomonas vaginalis TVAG_590210 I 0.000
TVAG_595500 Trichomonas vaginalis TVAG_595500 I 0.000
TVAG_597870 Trichomonas vaginalis TVAG_597870 I 0.000
TVAG_007350 Trichomonas vaginalis TVAG_007350 N 0.000
TVAG_008200 Trichomonas vaginalis TVAG_008200 N 0.000
TVAG_022950 Trichomonas vaginalis TVAG_022950 N 0.000
TVAG_048500 Trichomonas vaginalis TVAG_048500 N 0.000
TVAG_058570 Trichomonas vaginalis TVAG_058570 N 0.000
TVAG_123330 Trichomonas vaginalis TVAG_123330 N 0.000
TVAG_161450 Trichomonas vaginalis TVAG_161450 N 0.000
TVAG_167420 Trichomonas vaginalis TVAG_167420 N 0.000
TVAG_207810 Trichomonas vaginalis TVAG_207810 N 0.000
TVAG_261460 Trichomonas vaginalis TVAG_261460 N 0.000
TVAG_262670 Trichomonas vaginalis TVAG_262670 N 0.000
TVAG_298590 Trichomonas vaginalis TVAG_298590 N 0.000
TVAG_300190 Trichomonas vaginalis TVAG_300190 N 0.000
TVAG_384790 Trichomonas vaginalis TVAG_384790 N 0.000
TVAG_488790 Trichomonas vaginalis TVAG_488790 N 0.000
TVAG_515220 Trichomonas vaginalis TVAG_515220 N 0.000
TVAG_520250 Trichomonas vaginalis TVAG_520250 N 0.000
TVAG_550490 Trichomonas vaginalis TVAG_550490 N 0.000
TVAG_552140 Trichomonas vaginalis TVAG_552140 N 0.000
TVAG_557940 Trichomonas vaginalis TVAG_557940 N 0.000
TVAG_579060 Trichomonas vaginalis TVAG_579060 N 0.000
TVAG_581440 Trichomonas vaginalis TVAG_581440 N 0.000