PIIN_05295 (Piriformospora indica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PIIN_05295 T222383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
YHP1
M02191_2.00 		Saccharomyces cerevisiae
NWWATKRNN
NNYMATWWN		 PBM
Weirauch et al.(2014)
pTH6381 		0.731 0.491
YHP1
M08423_2.00 		Saccharomyces cerevisiae
TAATTG
CAATTA		 ChIP-chip
Mathelier et al.(2014)
MA0426.1 		0.731 0.491
YHP1
M08573_2.00 		Saccharomyces cerevisiae
WNTAATTR
YAATTANW		 Misc
DeBoer et al.(2011)
YDR451C_716 		0.731 0.491
YHP1
M10797_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$YHP1_01 		0.731 0.491
YOX1
M00058_2.00 		Saccharomyces cerevisiae
HTWAATTR
YAATTWAD		 PBM
Badis et al.(2008)
YOX1_2073 		0.705 0.456
YOX1
M01552_2.00 		Saccharomyces cerevisiae
BWWATDR
YHATWWV		 PBM
Zhu et al.(2009)
Yox1 		0.705 0.456
YOX1
M07487_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0433.1 		0.705 0.456
YOX1
M08575_2.00 		Saccharomyces cerevisiae
YTAATTWN
NWAATTAR		 Misc
DeBoer et al.(2011)
YML027W_498 		0.705 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCA71356 Homeodomain 51 107

Links

Other Homeodomain family TFs
Other Piriformospora indica TFs

79 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.000
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.000
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.000
BGIOSGA011326 Oryza indica BGIOSGA011326 I 0.000
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.000
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I 0.000
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.000
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.000
F775_25471 Aegilops tauschii F775_25471 I 0.000
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.000
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.000
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.000
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.000
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.000
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.000
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.000
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.000
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.000
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.000
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.000
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.000
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.000
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.000
OBART03G06100 Oryza barthii OBART03G06100 I 0.000
OMERI03G05920 Oryza meridionalis OMERI03G05920 I 0.000
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.000
ONIVA03G06110 Oryza nivara ONIVA03G06110 I 0.000
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.000
OPUNC03G05900 Oryza punctata OPUNC03G05900 I 0.000
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.000
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.000
ORGLA03G0058900 Oryza glaberrima ORGLA03G0058900 I 0.000
OS01G0313300 Oryza sativa OS01G0313300 I 0.000
OS03G0183300 Oryza sativa OS03G0183300 I 0.000
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.000
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.000
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.000
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.000
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.000
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.000
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.000
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.000
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.000
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.000
Sb01g045040 Sorghum bicolor Sb01g045040 I 0.000
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.000
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.000
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.000
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.000
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.000
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.000
Si002845m.g Setaria italica Si002845m.g I 0.000
Si031079m.g Setaria italica Si031079m.g I 0.000
Si036118m.g Setaria italica Si036118m.g I 0.000
Si038911m.g Setaria italica Si038911m.g I 0.000
TCM_020871 Theobroma cacao TCM_020871 I 0.000
TCM_026233 Theobroma cacao TCM_026233 I 0.000
TCM_026234 Theobroma cacao TCM_026234 I 0.000
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.000
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.000
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.000
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.000
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.000
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.000
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.000
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.000
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.000
Ca_07754 Cicer arietinum Ca_07754 I 0.000
Ca_12081 Cicer arietinum Ca_12081 I 0.000
Ca_23170 Cicer arietinum Ca_23170 I 0.000
Cla006080 Citrullus lanatus Cla006080 I 0.000
Cla007697 Citrullus lanatus Cla007697 I 0.000
Pm009382 Prunus mume Pm009382 I 0.000
Pm020604 Prunus mume Pm020604 I 0.000
29584.m000234 Ricinus communis 29584.m000234 I 0.000
29680.m001678 Ricinus communis 29680.m001678 I 0.000
29895.m000321 Ricinus communis 29895.m000321 I 0.000
29900.m001561 Ricinus communis 29900.m001561 I 0.000
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.000
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.000
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.000
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.000
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.000
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.000
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.000
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.000
mgf018693m Mimulus guttatus mgf018693m I 0.000
mgf023600m Mimulus guttatus mgf023600m I 0.000
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.000
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.000
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.000
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.000
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.000
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.000
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.000
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.000
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.000
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.000
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.000
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.000
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.000
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.000
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.000
MDP0000127134 Malus domestica MDP0000127134 I 0.000
MDP0000167207 Malus domestica MDP0000167207 I 0.000
MDP0000235313 Malus domestica MDP0000235313 I 0.000
MDP0000246808 Malus domestica MDP0000246808 I 0.000
MDP0000322279 Malus domestica MDP0000322279 I 0.000
MDP0000447570 Malus domestica MDP0000447570 I 0.000
MDP0000855671 Malus domestica MDP0000855671 I 0.000
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.000
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.000
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.000
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.000
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.000
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.000
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I 0.000
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I 0.000
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.000
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.000
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.000
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.000
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.000
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.000
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.000
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.000
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.000
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.000
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.000
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.000
AC206951.3_FG016 Zea mays AC206951.3_FG016 N 0.000
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.000
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.000
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.000
OBART07G26160 Oryza barthii OBART07G26160 N 0.000
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.000
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.000
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.000
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.000
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.000
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.000
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.000
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.000
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.000
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.000
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.000
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.000
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.000
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.000
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.000
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.000
OS03G0341000 Oryza sativa OS03G0341000 N 0.000
OS07G0674800 Oryza sativa OS07G0674800 N 0.000
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.000
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.000
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.000