CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SPU_014802
(
Strongylocentrotus purpuratus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
SPU_014802
T223719_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hlx
M00485_2.00
Mus musculus
NNNAWND
HNWTNNN
PBM
Berger et al.(2008)
Hlx1_2350
0.851
0.860
H2.0
M06489_2.00
Drosophila melanogaster
WTWATDA
THATWAW
B1H
Mathelier et al.(2014)
MA0448.1
0.843
0.754
H2.0
M06250_2.00
Drosophila melanogaster
TWWWWDA
THAWWWA
B1H
Zhu et al.(2011)
H2.0_Cell_FBgn0001170
0.843
0.754
H2.0
M06251_2.00
Drosophila melanogaster
WTWATTRN
NYAATWAW
B1H
Zhu et al.(2011)
H2.0_SOLEXA_FBgn0001170
0.843
0.754
Dbx
M02128_2.00
Drosophila melanogaster
WTTAATTA
TAATTAAW
PBM
Weirauch et al.(2014)
pTH6051
0.733
0.667
Dbx
M06550_2.00
Drosophila melanogaster
TTWATKA
TMATWAA
B1H
Mathelier et al.(2014)
MA0174.1
0.733
0.667
Dbx1
M00451_2.00
Mus musculus
WTTAATTA
TAATTAAW
PBM
Berger et al.(2008)
Dbx1_3486
0.733
0.649
Dbx2
M00499_2.00
Mus musculus
NNDTNNN
NNNAHNN
PBM
Berger et al.(2008)
Dbx2_3487
0.713
0.614
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPU_014802-tr
Homeodomain
332
388
SWSRAVFTSLQRKGLEKRFEIQKYVNKPERRQLASALGLSDAQVKVWFQNRRMKWRH
Links
Other
Homeodomain
family TFs
Other
Strongylocentrotus purpuratus
TFs
264 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSTTRG00000013155
Tursiops truncatus
ENSTTRG00000013155
N
KGM_06814
Danaus plexippus
KGM_06814
N
HDID_0001087701
Hymenolepis diminuta
HDID_0001087701
N
SPER_0000393601
Spirometra erinaceieuropaei
SPER_0000393601
N