Traes_6AS_2FB24B03E (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_6AS_2FB24B03E T224255_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
KNAT7
M01064_2.00 		Arabidopsis thaliana
TGACRKST
ASMYGTCA		 PBM
Sullivan et al.(2014)
pTH9798 		0.820 0.872
KNAT3
M02051_2.00 		Arabidopsis thaliana
NNNGACVBNN
NNVBGTCNNN		 PBM
Weirauch et al.(2014)
pTH7600 		0.816 0.915
KNAT4
M01238_2.00 		Arabidopsis thaliana
NNGACNNNN
NNNNGTCNN		 PBM
Lambert et al.(2019)
pTH9968 		0.816 0.894
HOS66
M02156_2.00 		Oryza sativa
NNNNDHNN
NNDHNNNN		 PBM
Weirauch et al.(2014)
pTH8332 		0.781 0.872
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.676 0.511
MEIS3
M03093_2.00 		Homo sapiens
DTGACANN
NNTGTCAH		 SELEX
Jolma et al.(2013)
MEIS3_1 		0.667 0.447
MEIS3
M03094_2.00 		Homo sapiens
TGACAGSTGTCA
TGACASCTGTCA		 SELEX
Jolma et al.(2013)
MEIS3_2 		0.667 0.447
MEIS3
M04951_2.00 		Homo sapiens
TGWCABVTGWCA
TGWCABVTGWCA		 SELEX
Yin et al.(2017)
MEIS3_eDBD_HT-SELEX 		0.667 0.447
MEIS3
M04952_2.00 		Homo sapiens
YGWCABVTGWCR
YGWCABVTGWCR		 SELEX
Yin et al.(2017)
MEIS3_eDBD_Methyl-HT-SELEX 		0.667 0.447
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_6AS_2FB24B03E.1 Homeodomain 130 179

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

507 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MYCTH_2312477 Myceliophthora thermophila MYCTH_2312477 N
estExt_fgenesh1_pg.C_20667 Cryphonectria parasitica estExt_fgenesh1_pg.C_20667 N
estExt_Genewise1Plus.C_sca_11_chr8_3_00004 Nectria haematococca estExt_Genewise1Plus.C_sca_11_chr8_3_00004 N
VHEMI04457 Torrubiella hemipterigena VHEMI04457 N
UCRPA7_7490 Togninia minima UCRPA7_7490 N
THITE_2124226 Thielavia terrestris THITE_2124226 N
SPBR_03635 Sporothrix brasiliensis SPBR_03635 N
S40288_06333 Stachybotrys chartarum S40288_06333 N
S40285_07194 Stachybotrys chlorohalonata S40285_07194 N
PODANS_6_5270 Podospora anserina PODANS_6_5270 N
NechaG71246 Fusarium solani NechaG71246 N
ACRE_023080 Acremonium chrysogenum ACRE_023080 N
HMPREF1624_08493 Sporothrix schenckii HMPREF1624_08493 N
GLRG_08744 Colletotrichum graminicola GLRG_08744 N
FVEG_11376 Fusarium verticillioides FVEG_11376 N
FOXG_13954 Fusarium oxysporum FOXG_13954 N
CTHT_0008850 Chaetomium thermophilum CTHT_0008850 N
CSUB01_11633 Colletotrichum sublineola CSUB01_11633 N
CMQ_4400 Grosmannia clavigera CMQ_4400 N
CHGG_10305 Chaetomium globosum CHGG_10305 N
CH063_03819 Colletotrichum higginsianum CH063_03819 N
CFIO01_03141 Colletotrichum fioriniae CFIO01_03141 N