VIT_09s0018g02100 (Vitis vinifera)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 VIT_09s0018g02100 T224545_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.745 0.759
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.745 0.759
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.745 0.759
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.722 0.648
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.722 0.648
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.711 0.611
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.711 0.611
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.711 0.611
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.691 0.500
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.691 0.593
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.691 0.593
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.691 0.593
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.691 0.593
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.670 0.611
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.670 0.611
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_09s0018g02100.t01 Homeodomain 17 71

Links

Other Homeodomain family TFs
Other Vitis vinifera TFs

572 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL5 Arabidopsis thaliana AT3G15270 D
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D
AMTR_s00022p00106940 Amborella trichopoda AMTR_s00022p00106940 I
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I
SPL6 Arabidopsis thaliana AT1G69170 I
BGIOSGA016888 Oryza indica BGIOSGA016888 I
BGIOSGA024253 Oryza indica BGIOSGA024253 I
SPL15 Oryza indica BGIOSGA028994 I
Bo2g062840 Brassica oleracea Bo2g062840 I
Bo3g042890 Brassica oleracea Bo3g042890 I
Bra021880 Brassica rapa Bra021880 I
Bra038324 Brassica rapa Bra038324 I
BRADI1G26720 Brachypodium distachyon BRADI1G26720 I
BRADI3G40240 Brachypodium distachyon BRADI3G40240 I
F775_02791 Aegilops tauschii F775_02791 I
F775_27970 Aegilops tauschii F775_27970 I
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I
GLYMA0005S50 Glycine max GLYMA0005S50 I
GLYMA01G08056 Glycine max GLYMA01G08056 I
GLYMA02G13371 Glycine max GLYMA02G13371 I
GLYMA03G27195 Glycine max GLYMA03G27195 I
GLYMA04G32002 Glycine max GLYMA04G32002 I
GLYMA07G14641 Glycine max GLYMA07G14641 I
GLYMA11G16556 Glycine max GLYMA11G16556 I
GLYMA13G31090 Glycine max GLYMA13G31090 I
GLYMA15G08270 Glycine max GLYMA15G08270 I
GLYMA16G05895 Glycine max GLYMA16G05895 I
GLYMA17G08840 Glycine max GLYMA17G08840 I
GLYMA19G26390 Glycine max GLYMA19G26390 I
GRMZM2G098557 Zea mays GRMZM2G098557 I
GRMZM2G148467 Zea mays GRMZM2G148467 I
GRMZM2G169270 Zea mays GRMZM2G169270 I
GSMUA_Achr1G08440_001 Musa acuminata GSMUA_Achr1G08440_001 I
GSMUA_Achr2G03070_001 Musa acuminata GSMUA_Achr2G03070_001 I
GSMUA_Achr4G16050_001 Musa acuminata GSMUA_Achr4G16050_001 I
GSMUA_Achr4G23650_001 Musa acuminata GSMUA_Achr4G23650_001 I
GSMUA_Achr4G26940_001 Musa acuminata GSMUA_Achr4G26940_001 I
GSMUA_Achr5G13440_001 Musa acuminata GSMUA_Achr5G13440_001 I
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I
GSMUA_Achr5G25090_001 Musa acuminata GSMUA_Achr5G25090_001 I
GSMUA_Achr7G20620_001 Musa acuminata GSMUA_Achr7G20620_001 I
LPERR04G17030 Leersia perrieri LPERR04G17030 I
LPERR08G17180 Leersia perrieri LPERR08G17180 I
LPERR11G11330 Leersia perrieri LPERR11G11330 I
MLOC_13032 Hordeum vulgare MLOC_13032 I
MLOC_4792 Hordeum vulgare MLOC_4792 I
MLOC_69667 Hordeum vulgare MLOC_69667 I
MTR_2g014200 Medicago truncatula MTR_2g014200 I
MTR_2g461920 Medicago truncatula MTR_2g461920 I
MTR_4g088555 Medicago truncatula MTR_4g088555 I
MTR_4g109770 Medicago truncatula MTR_4g109770 I
MTR_5g046670 Medicago truncatula MTR_5g046670 I
MTR_7g028740 Medicago truncatula MTR_7g028740 I
MTR_7g444860 Medicago truncatula MTR_7g444860 I
OB04G27960 Oryza brachyantha OB04G27960 I
OBART04G20940 Oryza barthii OBART04G20940 I
OBART07G15570 Oryza barthii OBART07G15570 I
OBART08G20320 Oryza barthii OBART08G20320 I
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I
OGLUM08G21580 Oryza glumaepatula OGLUM08G21580 I
OLONG_014873 Oryza longistaminata OLONG_014873 I
OMERI02G02300 Oryza meridionalis OMERI02G02300 I
OMERI04G17360 Oryza meridionalis OMERI04G17360 I
OMERI07G12270 Oryza meridionalis OMERI07G12270 I
OMERI11G11920 Oryza meridionalis OMERI11G11920 I
ONIVA04G19190 Oryza nivara ONIVA04G19190 I
ONIVA07G14170 Oryza nivara ONIVA07G14170 I
ONIVA08G22940 Oryza nivara ONIVA08G22940 I
OPUNC04G18620 Oryza punctata OPUNC04G18620 I
OPUNC08G18470 Oryza punctata OPUNC08G18470 I
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I
ORGLA08G0179900 Oryza glaberrima ORGLA08G0179900 I
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I
ORUFI08G22780 Oryza rufipogon ORUFI08G22780 I
SPL7 Oryza sativa OS04G0551500 I
SPL19 Oryza sativa OS11G0496600 I
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I
PGSC0003DMG400022824 Solanum tuberosum PGSC0003DMG400022824 I
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I
POPTR_0004s04630 Populus trichocarpa POPTR_0004s04630 I
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I
PRUPE_ppa011968mg Prunus persica PRUPE_ppa011968mg I
PRUPE_ppa012607mg Prunus persica PRUPE_ppa012607mg I
PRUPE_ppa017695mg Prunus persica PRUPE_ppa017695mg I
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I
Sb05g017510 Sorghum bicolor Sb05g017510 I
Sb06g024630 Sorghum bicolor Sb06g024630 I
Sb07g027420 Sorghum bicolor Sb07g027420 I
SPL9 Arabidopsis lyrata scaffold_403069.1 I
SELMODRAFT_28595 Selaginella moellendorffii SELMODRAFT_28595 I
SELMODRAFT_28598 Selaginella moellendorffii SELMODRAFT_28598 I
SELMODRAFT_28625 Selaginella moellendorffii SELMODRAFT_28625 I
SELMODRAFT_28626 Selaginella moellendorffii SELMODRAFT_28626 I
Si001804m.g Setaria italica Si001804m.g I
Si010262m.g Setaria italica Si010262m.g I
Si013151m.g Setaria italica Si013151m.g I
Si026656m.g Setaria italica Si026656m.g I
Si032170m.g Setaria italica Si032170m.g I
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I
Solyc10g009080.2 Solanum lycopersicum Solyc10g009080.2 I
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I
TCM_005620 Theobroma cacao TCM_005620 I
TCM_011483 Theobroma cacao TCM_011483 I
TCM_014330 Theobroma cacao TCM_014330 I
Traes_2AL_B45245746 Triticum aestivum Traes_2AL_B45245746 I
Traes_2AS_C2A4AFE6F Triticum aestivum Traes_2AS_C2A4AFE6F I
Traes_2BL_69E6AB6D1 Triticum aestivum Traes_2BL_69E6AB6D1 I
Traes_2BS_186EA570A Triticum aestivum Traes_2BS_186EA570A I
Traes_7AS_0F019FB93 Triticum aestivum Traes_7AS_0F019FB93 I
Traes_7DS_AB399594E Triticum aestivum Traes_7DS_AB399594E I
TRIUR3_23102 Triticum urartu TRIUR3_23102 I
TRIUR3_31982 Triticum urartu TRIUR3_31982 I
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I
SPL3 Vitis vinifera VIT_10s0003g00050 I
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I
Ca_10879 Cicer arietinum Ca_10879 I
Ca_19449 Cicer arietinum Ca_19449 I
Ca_24655 Cicer arietinum Ca_24655 I
Cla001541 Citrullus lanatus Cla001541 I
Cla009788 Citrullus lanatus Cla009788 I
Cla017596 Citrullus lanatus Cla017596 I
Cla018827 Citrullus lanatus Cla018827 I
Cla019331 Citrullus lanatus Cla019331 I
Cla021411 Citrullus lanatus Cla021411 I
Pm002693 Prunus mume Pm002693 I
Pm007035 Prunus mume Pm007035 I
Pm010075 Prunus mume Pm010075 I
Pm014154 Prunus mume Pm014154 I
Pm025028 Prunus mume Pm025028 I
Pm030597 Prunus mume Pm030597 I
30138.m003942 Ricinus communis 30138.m003942 I
30174.m008805 Ricinus communis 30174.m008805 I
30174.m009082 Ricinus communis 30174.m009082 I
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I
cassava39122.m1 Manihot esculenta cassava39122.m1 I
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I
Cucsa.113410 Cucumis sativus Cucsa.113410 I
Cucsa.192470 Cucumis sativus Cucsa.192470 I
Cucsa.198630 Cucumis sativus Cucsa.198630 I
Cucsa.259800 Cucumis sativus Cucsa.259800 I
Cucsa.272530 Cucumis sativus Cucsa.272530 I
Cucsa.349620 Cucumis sativus Cucsa.349620 I
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I
gw1.47.180.1 Physcomitrella patens gw1.47.180.1 I
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I
Aquca_007_00971 Aquilegia coerulea Aquca_007_00971 I
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I
Aquca_035_00165 Aquilegia coerulea Aquca_035_00165 I
Cagra.0007s0069 Capsella grandiflora Cagra.0007s0069 I
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I
Cagra.2636s0004 Capsella grandiflora Cagra.2636s0004 I
Carubv10014636m.g Capsella rubella Carubv10014636m.g I
Carubv10020369m.g Capsella rubella Carubv10020369m.g I
Carubv10023478m.g Capsella rubella Carubv10023478m.g I
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I
Ciclev10017104m.g Citrus clementina Ciclev10017104m.g I
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I
Ciclev10020532m.g Citrus clementina Ciclev10020532m.g I
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I
Eucgr.D02505 Eucalyptus grandis Eucgr.D02505 I
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I
Eucgr.K02545 Eucalyptus grandis Eucgr.K02545 I
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I
gene04565-v1.0-hybrid Fragaria vesca gene04565-v1.0-hybrid I
gene17738-v1.0-hybrid Fragaria vesca gene17738-v1.0-hybrid I
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I
gene29149-v1.0-hybrid Fragaria vesca gene29149-v1.0-hybrid I
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I
Gorai.004G047200 Gossypium raimondii Gorai.004G047200 I
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I
Gorai.007G362000 Gossypium raimondii Gorai.007G362000 I
Gorai.008G107300 Gossypium raimondii Gorai.008G107300 I
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I
Lus10000643.g Linum usitatissimum Lus10000643.g I
Lus10007984.g Linum usitatissimum Lus10007984.g I
Lus10012020.g Linum usitatissimum Lus10012020.g I
Lus10013999.g Linum usitatissimum Lus10013999.g I
Lus10015421.g Linum usitatissimum Lus10015421.g I
Lus10016275.g Linum usitatissimum Lus10016275.g I
Lus10018610.g Linum usitatissimum Lus10018610.g I
Lus10021034.g Linum usitatissimum Lus10021034.g I
Lus10021141.g Linum usitatissimum Lus10021141.g I
Lus10023818.g Linum usitatissimum Lus10023818.g I
Lus10036812.g Linum usitatissimum Lus10036812.g I
Lus10039846.g Linum usitatissimum Lus10039846.g I
MDP0000119458 Malus domestica MDP0000119458 I
MDP0000146640 Malus domestica MDP0000146640 I
MDP0000171877 Malus domestica MDP0000171877 I
MDP0000193702 Malus domestica MDP0000193702 I
MDP0000246046 Malus domestica MDP0000246046 I
MDP0000297978 Malus domestica MDP0000297978 I
MDP0000589558 Malus domestica MDP0000589558 I
MDP0000778465 Malus domestica MDP0000778465 I
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I
orange1.1g017256m.g Citrus sinensis orange1.1g017256m.g I
orange1.1g032310m.g Citrus sinensis orange1.1g032310m.g I
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I
Pavir.Fa00457 Panicum virgatum Pavir.Fa00457 I
Pavir.Fb01917 Panicum virgatum Pavir.Fb01917 I
Pavir.Ga01083 Panicum virgatum Pavir.Ga01083 I
Pavir.Gb01121 Panicum virgatum Pavir.Gb01121 I
Pavir.Hb01173 Panicum virgatum Pavir.Hb01173 I
Pavir.J02262 Panicum virgatum Pavir.J02262 I
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I
PK03565.1 Cannabis sativa PK03565.1 I
PK17790.1 Cannabis sativa PK17790.1 I
PK19500.1 Cannabis sativa PK19500.1 I
chr3.CM0160.520.nc Lotus japonicus chr3.CM0160.520.nc I
chr6.CM0114.270.nc Lotus japonicus chr6.CM0114.270.nc I
LjSGA_061446.1 Lotus japonicus LjSGA_061446.1 I
PDK_20s1709081g002 Phoenix dactylifera PDK_20s1709081g002 I
Bo6g108620 Brassica oleracea Bo6g108620 N
Bra004363 Brassica rapa Bra004363 N
OB09G21350 Oryza brachyantha OB09G21350 N
OPUNC07G14360 Oryza punctata OPUNC07G14360 N
SELMODRAFT_28634 Selaginella moellendorffii SELMODRAFT_28634 N
SELMODRAFT_28635 Selaginella moellendorffii SELMODRAFT_28635 N
Bostr.10273s0456 Boechera stricta Bostr.10273s0456 N
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N
Lus10021614.g Linum usitatissimum Lus10021614.g N
MDP0000142582 Malus domestica MDP0000142582 N