Afo_R009187 (Aptenodytes forsteri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Afo_R009187 T225113_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.821 0.909
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.777 0.873
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.776 0.873
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.776 0.873
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.776 0.873
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.776 0.873
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.776 0.873
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.776 0.873
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.768 0.836
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.768 0.836
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.768 0.836
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.768 0.836
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.768 0.836
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.768 0.836
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R009187 Homeodomain 1 58

Links

Other Homeodomain family TFs
Other Aptenodytes forsteri TFs

390 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KLF6 Homo sapiens ENSG00000067082 D 0.000
ENSPFOG00000015451 Poecilia formosa ENSPFOG00000015451 I 0.000
Sakowv30032823m.g Saccoglossus kowalevskii Sakowv30032823m.g I 0.000
KLF6 Callithrix jacchus ENSCJAG00000032379 I 0.000
ENSLOCG00000003791 Lepisosteus oculatus ENSLOCG00000003791 I 0.000
Tal_R005095 Tyto alba Tal_R005095 N 0.000
HHAL008173-PA Halyomorpha halys HHAL008173-PA N 0.000
HHAL000942-PA Halyomorpha halys HHAL000942-PA N 0.000
CLEC013286 Cimex lectularius CLEC013286 N 0.000
CLEC000374 Cimex lectularius CLEC000374 N 0.000
Ocbimv22007603m.g Octopus bimaculoides Ocbimv22007603m.g N 0.000
estExt_fgenesh2_pg.C_20012 Branchiostoma floridae estExt_fgenesh2_pg.C_20012 N 0.000
LDEC024398 Leptinotarsa decemlineata LDEC024398 N 0.000
Tal_R002680 Tyto alba Tal_R002680 N 0.000
Pvit_06515 Pogona vitticeps Pvit_06515 N 0.000
Ogr05338 Ophisaurus gracilis Ogr05338 N 0.000
Hsal_02965--XP_624772.1_APIME Harpegnathos saltator Hsal_02965--XP_624772.1_APIME N 0.000
Cflo_16445--XP_624772.1_APIME Camponotus floridanus Cflo_16445--XP_624772.1_APIME N 0.000
Cflo_01443--XP_624772.1_APIME Camponotus floridanus Cflo_01443--XP_624772.1_APIME N 0.000
Cflo_00615--XP_001121679.1_APIME Camponotus floridanus Cflo_00615--XP_001121679.1_APIME N 0.000
Brh_R008554 Buceros rhinoceros Brh_R008554 N 0.000
Brh_R001625 Buceros rhinoceros Brh_R001625 N 0.000
AQUA001972 Anopheles quadriannulatus AQUA001972 N 0.000
SROB_0000810301 Schistosoma rodhaini SROB_0000810301 N 0.000
SMTD_0002129001 Schistosoma mattheei SMTD_0002129001 N 0.000
OESDEN_21938 Oesophagostomum dentatum OESDEN_21938 N 0.000
HDID_0000086901 Hymenolepis diminuta HDID_0000086901 N 0.000
ANCCEY_14935 Ancylostoma ceylanicum ANCCEY_14935 N 0.000
PPAI010678 Phlebotomus papatasi PPAI010678 N 0.000
LLOJ001749 Lutzomyia longipalpis LLOJ001749 N 0.000
BGLB001603 Biomphalaria glabrata BGLB001603 N 0.000
LDEC010928 Leptinotarsa decemlineata LDEC010928 N 0.000
AMEM000352 Anopheles merus AMEM000352 N 0.000
AMEC017016 Anopheles melas AMEC017016 N 0.000
AEPI009274 Anopheles epiroticus AEPI009274 N 0.000
AEPI003098 Anopheles epiroticus AEPI003098 N 0.000
ACOM031370 Anopheles coluzzii ACOM031370 N 0.000
AARA009355 Anopheles arabiensis AARA009355 N 0.000
SMAR000017 Strigamia maritima SMAR000017 N 0.000
klf4 Danio rerio ENSDARG00000079922 N 0.000
KLF5 Ochotona princeps ENSOPRG00000007620 N 0.000
ENSOPRG00000000197 Ochotona princeps ENSOPRG00000000197 N 0.000
KLF12 Oryctolagus cuniculus ENSOCUG00000004244 N 0.000
ENSOARG00000018838 Ovis aries ENSOARG00000018838 N 0.000
ENSOARG00000006771 Ovis aries ENSOARG00000006771 N 0.000
ENSGALG00000028383 Gallus gallus ENSGALG00000028383 N 0.000
ENSFALG00000014565 Ficedula albicollis ENSFALG00000014565 N 0.000
KLF1 Echinops telfairi ENSETEG00000002006 N 0.000
KLF3 Procavia capensis ENSPCAG00000015573 N 0.000
ENSBTAG00000048085 Bos taurus ENSBTAG00000048085 N 0.000
KLF6 Bos taurus ENSBTAG00000015188 N 0.000
CPIJ012901 Culex quinquefasciatus CPIJ012901 N 0.000
CJA02603 Caenorhabditis japonica CJA02603 N 0.000
Bm12319 Brugia malayi Bm12319 N 0.000
Bm11731 Brugia malayi Bm11731 N 0.000
ACEP19659 Atta cephalotes ACEP19659 N 0.000
GA28679 Drosophila pseudoobscura FBgn0250039 N 0.000
TC003611 Tribolium castaneum TC003611 N 0.000
CpipJ_CPIJ012901 Culex pipiens CpipJ_CPIJ012901 N 0.000
SINV23345 Solenopsis invicta SINV23345 N 0.000
RPRC011844 Rhodnius prolixus RPRC011844 N 0.000
PHUM399820 Pediculus humanus PHUM399820 N 0.000
MESCA001789 Megaselia scalaris MESCA001789 N 0.000
L798_04124 Zootermopsis nevadensis L798_04124 N 0.000
ISCW004118 Ixodes scapularis ISCW004118 N 0.000
Alligator_sinensis_CCG013371.1 Alligator sinensis Alligator_sinensis_CCG013371.1 N 0.000
GA25126 Drosophila pseudoobscura FBgn0246509 N 0.000
ENSTTRG00000010639 Tursiops truncatus ENSTTRG00000010639 N 0.000
KLF3 Tupaia belangeri ENSTBEG00000015639 N 0.000
KLF10 Tupaia belangeri ENSTBEG00000007597 N 0.000
ENSSHAG00000001834 Sarcophilus harrisii ENSSHAG00000001834 N 0.000
Klf7 Rattus norvegicus ENSRNOG00000012961 N 0.000
KLF1 Pteropus vampyrus ENSPVAG00000014711 N 0.000