Myotis_brandtii_IRX4_10035803 (Myotis brandtii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Myotis_brandtii_IRX4_10035803 T226390_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.867 1.000
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.790 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.788 0.929
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.788 0.929
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.788 0.929
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.780 0.893
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.780 0.893
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.780 0.893
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.893
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.893
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.893
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.893
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.893
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.893
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_IRX4_10035803 Homeodomain 5 63

Links

Other Homeodomain family TFs
Other Myotis brandtii TFs

389 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC001 Arabidopsis thaliana AT1G01010 D 0.000
Traes_6BL_D00F04562 Triticum aestivum Traes_6BL_D00F04562 I 0.000
GRMZM2G140901 Zea mays GRMZM2G140901 I 0.000
GRMZM5G857701 Zea mays GRMZM5G857701 I 0.000
Si017967m.g Setaria italica Si017967m.g I 0.000
OGLUM02G38020 Oryza glumaepatula OGLUM02G38020 I 0.000
Sb04g036640 Sorghum bicolor Sb04g036640 I 0.000
Pavir.Aa00144 Panicum virgatum Pavir.Aa00144 I 0.000
LPERR02G30240 Leersia perrieri LPERR02G30240 I 0.000
TCM_003998 Theobroma cacao TCM_003998 N 0.000
Solyc09g025310.2 Solanum lycopersicum Solyc09g025310.2 N 0.000
Traes_2BL_D718E27A9 Triticum aestivum Traes_2BL_D718E27A9 N 0.000
Traes_6AL_B272C86BE Triticum aestivum Traes_6AL_B272C86BE N 0.000
Traes_6AL_B92597EA9 Triticum aestivum Traes_6AL_B92597EA9 N 0.000
Solyc06g008360.2 Solanum lycopersicum Solyc06g008360.2 N 0.000
Traes_6BL_99F790D57 Triticum aestivum Traes_6BL_99F790D57 N 0.000
Si018001m.g Setaria italica Si018001m.g N 0.000
Si036835m.g Setaria italica Si036835m.g N 0.000
ORUFI04G27160 Oryza rufipogon ORUFI04G27160 N 0.000
Si010799m.g Setaria italica Si010799m.g N 0.000
Sb04g026440 Sorghum bicolor Sb04g026440 N 0.000
PRUPE_ppa009628mg Prunus persica PRUPE_ppa009628mg N 0.000
PGSC0003DMG400020147 Solanum tuberosum PGSC0003DMG400020147 N 0.000
OS06G0675600 Oryza sativa OS06G0675600 N 0.000
OS04G0515900 Oryza sativa OS04G0515900 N 0.000
OS02G0810900 Oryza sativa OS02G0810900 N 0.000
ORUFI06G26420 Oryza rufipogon ORUFI06G26420 N 0.000
ORGLA04G0158100 Oryza glaberrima ORGLA04G0158100 N 0.000
Gorai.007G147300 Gossypium raimondii Gorai.007G147300 N 0.000
PDK_20s1648061g001 Phoenix dactylifera PDK_20s1648061g001 N 0.000
PDK_20s1301681g003 Phoenix dactylifera PDK_20s1301681g003 N 0.000
PK19051.1 Cannabis sativa PK19051.1 N 0.000
Pavir.J11268 Panicum virgatum Pavir.J11268 N 0.000
Pavir.Ib03261 Panicum virgatum Pavir.Ib03261 N 0.000
Pavir.Gb00655 Panicum virgatum Pavir.Gb00655 N 0.000
Pavir.Ga01251 Panicum virgatum Pavir.Ga01251 N 0.000
Pavir.Ab02337 Panicum virgatum Pavir.Ab02337 N 0.000
Pavir.Aa01668 Panicum virgatum Pavir.Aa01668 N 0.000
MDP0000697030 Malus domestica MDP0000697030 N 0.000
Traes_6DL_1ABE78799 Triticum aestivum Traes_6DL_1ABE78799 N 0.000
Gorai.001G254300 Gossypium raimondii Gorai.001G254300 N 0.000
Gorai.001G178800 Gossypium raimondii Gorai.001G178800 N 0.000
gene08112-v1.0-hybrid Fragaria vesca gene08112-v1.0-hybrid N 0.000
Eucgr.K03256 Eucalyptus grandis Eucgr.K03256 N 0.000
mgf018312m Mimulus guttatus mgf018312m N 0.000
Pm020580 Prunus mume Pm020580 N 0.000
TRIUR3_33179 Triticum urartu TRIUR3_33179 N 0.000
TRIUR3_32754 Triticum urartu TRIUR3_32754 N 0.000
TRIUR3_23299 Triticum urartu TRIUR3_23299 N 0.000
Traes_6DL_8A1342D56 Triticum aestivum Traes_6DL_8A1342D56 N 0.000
GLYMA13G18620 Glycine max GLYMA13G18620 N 0.000
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N 0.000
GSMUA_Achr8G18980_001 Musa acuminata GSMUA_Achr8G18980_001 N 0.000
GSMUA_Achr5G18670_001 Musa acuminata GSMUA_Achr5G18670_001 N 0.000
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N 0.000
GSMUA_Achr1G10860_001 Musa acuminata GSMUA_Achr1G10860_001 N 0.000
GSMUA_Achr11G22760_001 Musa acuminata GSMUA_Achr11G22760_001 N 0.000
GSMUA_Achr11G00880_001 Musa acuminata GSMUA_Achr11G00880_001 N 0.000
GRMZM2G081930 Zea mays GRMZM2G081930 N 0.000
GRMZM2G062009 Zea mays GRMZM2G062009 N 0.000
GRMZM2G043813 Zea mays GRMZM2G043813 N 0.000
GLYMA19G34881 Glycine max GLYMA19G34881 N 0.000
MLOC_12466 Hordeum vulgare MLOC_12466 N 0.000
GLYMA10G04350 Glycine max GLYMA10G04350 N 0.000
GLYMA03G32116 Glycine max GLYMA03G32116 N 0.000
F775_17109 Aegilops tauschii F775_17109 N 0.000
F775_08585 Aegilops tauschii F775_08585 N 0.000
BRADI5G15587 Brachypodium distachyon BRADI5G15587 N 0.000
BRADI3G54817 Brachypodium distachyon BRADI3G54817 N 0.000
BGIOSGA023457 Oryza indica BGIOSGA023457 N 0.000
BGIOSGA016756 Oryza indica BGIOSGA016756 N 0.000
BGIOSGA014342 Oryza indica BGIOSGA014342 N 0.000
BGIOSGA009257 Oryza indica BGIOSGA009257 N 0.000
OMERI02G34720 Oryza meridionalis OMERI02G34720 N 0.000
ORUFI02G38340 Oryza rufipogon ORUFI02G38340 N 0.000
ORGLA06G0205600 Oryza glaberrima ORGLA06G0205600 N 0.000
ORGLA02G0320500 Oryza glaberrima ORGLA02G0320500 N 0.000
OPUNC06G22270 Oryza punctata OPUNC06G22270 N 0.000
OPUNC04G16450 Oryza punctata OPUNC04G16450 N 0.000
OPUNC02G33860 Oryza punctata OPUNC02G33860 N 0.000
ONIVA04G01950 Oryza nivara ONIVA04G01950 N 0.000
ONIVA02G39640 Oryza nivara ONIVA02G39640 N 0.000
ONIVA02G35380 Oryza nivara ONIVA02G35380 N 0.000
OMERI06G24740 Oryza meridionalis OMERI06G24740 N 0.000
ORUFI04G20200 Oryza rufipogon ORUFI04G20200 N 0.000
OLONG_011232 Oryza longistaminata OLONG_011232 N 0.000
OGLUM06G25850 Oryza glumaepatula OGLUM06G25850 N 0.000
OGLUM04G18750 Oryza glumaepatula OGLUM04G18750 N 0.000
OBART06G24550 Oryza barthii OBART06G24550 N 0.000
OBART04G18700 Oryza barthii OBART04G18700 N 0.000
OBART02G36830 Oryza barthii OBART02G36830 N 0.000
OB04G25790 Oryza brachyantha OB04G25790 N 0.000
OB02G43380 Oryza brachyantha OB02G43380 N 0.000
MTR_7g097090 Medicago truncatula MTR_7g097090 N 0.000
MLOC_5165 Hordeum vulgare MLOC_5165 N 0.000