30202.m000250 (Ricinus communis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 30202.m000250 T227022_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WOX13
M02049_2.00 		Arabidopsis thaliana
YTGATTGA
TCAATCAR		 PBM
Weirauch et al.(2014)
pTH6461 		0.226 1.000
WOX13
M00866_2.00 		Arabidopsis thaliana
NNTGATTGAN
NTCAATCANN		 PBM
Franco-Zorrilla et al.(2014)
WOX13 		0.226 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30202.m000250 Homeodomain 34 53

Links

Other Homeodomain family TFs
Other Ricinus communis TFs

130 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WOX13 Arabidopsis thaliana AT4G35550 D 0.226
PITX1 Homo sapiens ENSG00000069011 D 0.663
CRX Homo sapiens ENSG00000105392 D 0.674
Pitx1 Mus musculus ENSMUSG00000021506 D 0.641
Otx2 Mus musculus ENSMUSG00000021848 D 0.666
Pitx3 Mus musculus ENSMUSG00000025229 D 0.653
Crx Mus musculus ENSMUSG00000041578 D 0.649
ACEP26487 Atta cephalotes ACEP26487 I 0.649
CapteG187461 Capitella teleta CapteG187461 I 0.611
ENSAPLG00000000623 Anas platyrhynchos ENSAPLG00000000623 I 0.610
ENSCING00000013809 Ciona intestinalis ENSCING00000013809 I 0.649
HOXB3 Echinops telfairi ENSETEG00000007761 I 0.644
ENSMEUG00000002781 Macropus eugenii ENSMEUG00000002781 I 0.650
ENSMICG00000004221 Microcebus murinus ENSMICG00000004221 I 0.624
Rhox9 Mus musculus ENSMUSG00000068048 I 0.603
ENSMUSG00000097436 Mus musculus ENSMUSG00000097436 I 0.603
ENSOANG00000031547 Ornithorhynchus anatinus ENSOANG00000031547 I 0.599
ENSPMAG00000010239 Petromyzon marinus ENSPMAG00000010239 I 0.634
BARX2 Tupaia belangeri ENSTBEG00000000641 I 0.644
ENSTGUG00000004229 Taeniopygia guttata ENSTGUG00000004229 I 0.631
BARX2 Vicugna pacos ENSVPAG00000010480 I 0.644
GH24924 Drosophila grimshawi FBgn0132379 I 0.603
GB40331 Apis mellifera GB40331 I 0.649
GB42226 Apis mellifera GB42226 I 0.649
HMEL006348 Heliconius melpomene HMEL006348 I 0.605
ISCW005275 Ixodes scapularis ISCW005275 I 0.610
ISCW017713 Ixodes scapularis ISCW017713 I 0.649
MESCA002384 Megaselia scalaris MESCA002384 I 0.640
MESCA003695 Megaselia scalaris MESCA003695 I 0.630
MESCA012524 Megaselia scalaris MESCA012524 I 0.678
ML145813a Mnemiopsis leidyi ML145813a I 0.636
NEMVEDRAFT_v1g81249 Nematostella vectensis NEMVEDRAFT_v1g81249 I 0.610
HB-4 Populus trichocarpa POPTR_0005s10480 I 0.226
RPRC011667 Rhodnius prolixus RPRC011667 I 0.644
SINV23302 Solenopsis invicta SINV23302 I 0.649
Smp_150810 Schistosoma mansoni Smp_150810 I 0.666
VIT_04s0044g00150 Vitis vinifera VIT_04s0044g00150 I 0.226
Afo_R006907 Aptenodytes forsteri Afo_R006907 I 0.605
cassava23423.valid.m1 Manihot esculenta cassava23423.valid.m1 I 0.226
e_gw.814.10.1 Branchiostoma floridae e_gw.814.10.1 I 0.649
Cagra.2350s0096 Capsella grandiflora Cagra.2350s0096 I 0.226
Carubv10005217m.g Capsella rubella Carubv10005217m.g I 0.226
SapurV1A.1240s0080 Salix purpurea SapurV1A.1240s0080 I 0.226
Thhalv10025989m.g Eutrema salsugineum Thhalv10025989m.g I 0.226
CLEC007143 Cimex lectularius CLEC007143 I 0.649
LCUP010259 Lucilia cuprina LCUP010259 I 0.649
LDEC010767 Leptinotarsa decemlineata LDEC010767 I 0.649
Sjc_0039470 Schistosoma japonicum Sjc_0039470 I 0.636
Sjc_0051960 Schistosoma japonicum Sjc_0051960 I 0.667
Sjc_0075360 Schistosoma japonicum Sjc_0075360 I 0.612
SNAPOd2T00009387001 Oikopleura dioica SNAPOd2T00009387001 I 0.610
SNAPOd2T00020544001 Oikopleura dioica SNAPOd2T00020544001 I 0.653
en1 Xenopus tropicalis XB-GENE-5737237 I 0.613
AALB000327 Anopheles albimanus AALB000327 I 0.649
AARA005138 Anopheles arabiensis AARA005138 I 0.649
ACHR004287 Anopheles christyi ACHR004287 I 0.649
ADIR006768 Anopheles dirus ADIR006768 I 0.649
AEPI004828 Anopheles epiroticus AEPI004828 I 0.649
AFUN001295 Anopheles funestus AFUN001295 I 0.649
AMAM009154 Anopheles maculatus AMAM009154 I 0.649
AMEC011816 Anopheles melas AMEC011816 I 0.644
AMEC016887 Anopheles melas AMEC016887 I 0.649
AMIN006279 Anopheles minimus AMIN006279 I 0.649
AQUA000678 Anopheles quadriannulatus AQUA000678 I 0.649
BGLB001705 Biomphalaria glabrata BGLB001705 I 0.649
BGLB005976 Biomphalaria glabrata BGLB005976 I 0.647
A_07699 Schistosoma haematobium A_07699 I 0.657
ANCCEY_13939 Ancylostoma ceylanicum ANCCEY_13939 I 0.653
ANCDUO_09759 Ancylostoma duodenale ANCDUO_09759 I 0.649
augustus_masked-nMf.1.1.scaf20573-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf20573-processed-gene-0.0 I 0.629
BTMF_0000212801 Brugia timori BTMF_0000212801 I 0.609
CGOC_0000387301 Cylicostephanus goldi CGOC_0000387301 I 0.649
D915_08446 Fasciola hepatica D915_08446 I 0.666
D918_03366 Trichuris suis D918_03366 I 0.636
DME_0000391201 Dracunculus medinensis DME_0000391201 I 0.633
genemark-nMf.1.1.scaf05885-processed-gene-0.2 Meloidogyne floridensis genemark-nMf.1.1.scaf05885-processed-gene-0.2 I 0.603
GPLIN_000434400 Globodera pallida GPLIN_000434400 I 0.666
GPLIN_001127900 Globodera pallida GPLIN_001127900 I 0.637
HPLM_0000640301 Haemonchus placei HPLM_0000640301 I 0.669
HPLM_0001802901 Haemonchus placei HPLM_0001802901 I 0.640
L893_g29073 Steinernema glaseri L893_g29073 I 0.629
MhA1_Contig1070.frz3.gene23 Meloidogyne hapla MhA1_Contig1070.frz3.gene23 I 0.623
MhA1_Contig290.frz3.gene10 Meloidogyne hapla MhA1_Contig290.frz3.gene10 I 0.657
NBR_0000086401 Nippostrongylus brasiliensis NBR_0000086401 I 0.629
nDi.2.2.2.g11780 Dirofilaria immitis nDi.2.2.2.g11780 I 0.636
OESDEN_08182 Oesophagostomum dentatum OESDEN_08182 I 0.654
OFLC_0001568201 Onchocerca flexuosa OFLC_0001568201 I 0.631
PXEA_0000709901 Protopolystoma xenopodis PXEA_0000709901 I 0.666
PXEA_0000830701 Protopolystoma xenopodis PXEA_0000830701 I 0.637
SCUD_0000012401 Schistosoma curassoni SCUD_0000012401 I 0.657
SCUD_0002251201 Schistosoma curassoni SCUD_0002251201 I 0.599
SMTD_0000630101 Schistosoma mattheei SMTD_0000630101 I 0.669
SMTD_0001421101 Schistosoma mattheei SMTD_0001421101 I 0.657
SROB_0000568701 Schistosoma rodhaini SROB_0000568701 I 0.624
SROB_0000845601 Schistosoma rodhaini SROB_0000845601 I 0.657
SROB_0001170301 Schistosoma rodhaini SROB_0001170301 I 0.636
SVUK_0000982701 Strongylus vulgaris SVUK_0000982701 I 0.623
TELCIR_15720 Teladorsagia circumcincta TELCIR_15720 I 0.669
TMUE_s0047002700 Trichuris muris TMUE_s0047002700 I 0.630
TMUE_s0096002400 Trichuris muris TMUE_s0096002400 I 0.658
TRE_0000552801 Trichobilharzia regenti TRE_0000552801 I 0.603
TRE_0000840901 Trichobilharzia regenti TRE_0000840901 I 0.616
Bra002576 Brassica rapa Bra002576 N 0.622
Bra020321 Brassica rapa Bra020321 N 0.622
Bra034855 Brassica rapa Bra034855 N 0.675
EMIHUDRAFT_459477 Emiliania huxleyi EMIHUDRAFT_459477 N 0.634
Rhox2h Mus musculus ENSMUSG00000079627 N 0.605
Rhox2f Mus musculus ENSMUSG00000095741 N 0.605
GRMZM2G419252 Zea mays GRMZM2G419252 N 0.634
OB05G33420 Oryza brachyantha OB05G33420 N 0.634
OBART08G07280 Oryza barthii OBART08G07280 N 0.679
OLONG_015615 Oryza longistaminata OLONG_015615 N 0.671
OMERI03G30000 Oryza meridionalis OMERI03G30000 N 0.665
ONIVA03G16810 Oryza nivara ONIVA03G16810 N 0.679
TRIUR3_03990 Triticum urartu TRIUR3_03990 N 0.803
Ca_12504 Cicer arietinum Ca_12504 N 0.630
gene31986-v1.0-hybrid Fragaria vesca gene31986-v1.0-hybrid N 0.719
MDP0000250248 Malus domestica MDP0000250248 N 0.765
MDP0000854437 Malus domestica MDP0000854437 N 0.677
MDP0000874562 Malus domestica MDP0000874562 N 0.677
PK01458.1 Cannabis sativa PK01458.1 N 0.697
Sjc_0026350 Schistosoma japonicum Sjc_0026350 N 0.611
SNAPOd2T00004995001 Oikopleura dioica SNAPOd2T00004995001 N 0.603
AFUN010407 Anopheles funestus AFUN010407 N 0.611
ACAC_0001096101 Angiostrongylus cantonensis ACAC_0001096101 N 0.621
ACOC_0000018801 Angiostrongylus costaricensis ACOC_0000018801 N 0.621
HPLM_0001305101 Haemonchus placei HPLM_0001305101 N 0.603
SMTD_0002268201 Schistosoma mattheei SMTD_0002268201 N 0.621
TELCIR_03058 Teladorsagia circumcincta TELCIR_03058 N 0.603
TELCIR_25656 Teladorsagia circumcincta TELCIR_25656 N 0.637