CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mgf012660m
(
Mimulus guttatus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
mgf012660m
T227710_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT
AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.844
0.807
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN
NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.803
0.860
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.803
0.860
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.803
0.860
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.801
0.860
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.801
0.860
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.773
0.684
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.773
0.684
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.750
0.825
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.750
0.825
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV
BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.750
0.825
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mgf012660m
Homeodomain
150
206
ARKKLRLSKDQSATLEESFKEHNTLNPKQKMALAKRLGLRPRQVEVWFQNRRARTKL
Links
Other
Homeodomain
family TFs
Other
Mimulus guttatus
TFs
695 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CAD26261
Encephalitozoon cuniculi
CAD26261
D
NEMVEDRAFT_v1g105595
Nematostella vectensis
NEMVEDRAFT_v1g105595
D
NERG_00880
Nematocida sp
NERG_00880
I
PTTG_07330
Puccinia triticina
PTTG_07330
I
POSPLDRAFT_98870
Postia placenta
POSPLDRAFT_98870
I
PLEOSDRAFT_173849
Pleurotus ostreatus
PLEOSDRAFT_173849
I
PIIN_02203
Piriformospora indica
PIIN_02203
I
PHLGIDRAFT_55548
Phlebiopsis gigantea
PHLGIDRAFT_55548
I
PHACADRAFT_257545
Phanerochaete carnosa
PHACADRAFT_257545
I
PGTG_00338
Puccinia graminis
PGTG_00338
I
PAXRUDRAFT_10369
Paxillus rubicundulus
PAXRUDRAFT_10369
I
RHTO_02593
Rhodosporidium toruloides
RHTO_02593
I
NEPG_01845
Nematocida parisii ertm1
NEPG_01845
I
NDAI_0B03290
Naumovozyma dairenensis
NDAI_0B03290
I
NCER_100315
Nosema ceranae
NCER_100315
I
NCER_100211
Nosema ceranae
NCER_100211
I
NCAS_0B05980
Naumovozyma castellii
NCAS_0B05980
I
NBO_85g0005
Nosema bombycis
NBO_85g0005
I
NBO_6g0031
Nosema bombycis
NBO_6g0031
I
SERLA73DRAFT_72643
Serpula lacrymans
SERLA73DRAFT_72643
I
THOM_0497
Trachipleistophora hominis
THOM_0497
I
VCUG_00708
Vavraia culicis
VCUG_00708
I
WALSEDRAFT_59197
Wallemia sebi
WALSEDRAFT_59197
I
YALI0_F16852g
Yarrowia lipolytica
YALI0_F16852g
I
estExt_fgeneshDP_pg.C_350041
Dictyostelium purpureum
estExt_fgeneshDP_pg.C_350041
I
fgenesh1_pg.C_scaffold_15000074
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_15000074
I
fgeneshMC_pg.1_#_125
Mucor circinelloides
fgeneshMC_pg.1_#_125
I
fgeneshMC_pg.1_#_1591
Mucor circinelloides
fgeneshMC_pg.1_#_1591
I
fgeneshMC_pg.1_#_69
Mucor circinelloides
fgeneshMC_pg.1_#_69
I
fgeneshMC_pg.4_#_986
Mucor circinelloides
fgeneshMC_pg.4_#_986
I
fgeneshPB_pg.18__155
Phycomyces blakesleeanus
fgeneshPB_pg.18__155
I
fgeneshPB_pg.6__195
Phycomyces blakesleeanus
fgeneshPB_pg.6__195
I
EFA86584.1
Polysphondylium pallidum
EFA86584.1
I
Scas_Contig613.11
Saccharomyces castellii
Scas_Contig613.11
I
H311_05138
Anncaliia algerae
H311_05138
I
RO3G_03200
Rhizopus oryzae
RO3G_03200
I
RO3G_08777
Rhizopus oryzae
RO3G_08777
I
SPPG_05107
Spizellomyces punctatus
SPPG_05107
I
BOTBODRAFT_214576
Botryobasidium botryosum
BOTBODRAFT_214576
I
CC1G_01962
Coprinopsis cinerea
CC1G_01962
I
CY34DRAFT_106181
Suillus luteus
CY34DRAFT_106181
I
CY34DRAFT_109842
Suillus luteus
CY34DRAFT_109842
I
warA
Dictyostelium discoideum
DDB_G0291075
I
E5Q_01806
Mixia osmundae
E5Q_01806
I
EHEL_031090
Encephalitozoon hellem
EHEL_031090
I
Eint_031070
Encephalitozoon intestinalis
Eint_031070
I
EROM_031050
Encephalitozoon romaleae
EROM_031050
I
FOMPIDRAFT_1128018
Fomitopsis pinicola
FOMPIDRAFT_1128018
I
GALMADRAFT_211191
Galerina marginata
GALMADRAFT_211191
I
GLOINDRAFT_21145
Rhizophagus irregularis
GLOINDRAFT_21145
I
RO3G_02291
Rhizopus oryzae
RO3G_02291
I
J056_004115
Wallemia ichthyophaga
J056_004115
I
JAAARDRAFT_47621
Jaapia argillacea
JAAARDRAFT_47621
I
K443DRAFT_127593
Laccaria amethystina
K443DRAFT_127593
I
KNAG_0A05600
Kazachstania naganishii
KNAG_0A05600
I
LACBIDRAFT_293988
Laccaria bicolor
LACBIDRAFT_293988
I
M378DRAFT_8263
Amanita muscaria
M378DRAFT_8263
I
M407DRAFT_11655
Tulasnella calospora
M407DRAFT_11655
I
M407DRAFT_4599
Tulasnella calospora
M407DRAFT_4599
I
M408DRAFT_258951
Serendipita vermifera
M408DRAFT_258951
I
M413DRAFT_413744
Hebeloma cylindrosporum
M413DRAFT_413744
I
M896_030550
Ordospora colligata
M896_030550
I
Moror_6758
Moniliophthora roreri
Moror_6758
I
NAPIS_ORF00184
Nosema apis
NAPIS_ORF00184
I
NAPIS_ORF00325
Nosema apis
NAPIS_ORF00325
I
NBO_11g0012
Nosema bombycis
NBO_11g0012
I