Bostr.7867s0841 (Boechera stricta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Bostr.7867s0841 T228158_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MTR_2g038000
M02141_2.00 		Medicago truncatula
NDNYWNNNNN
NNNNNWRNHN		 PBM
Weirauch et al.(2014)
pTH6339 		0.683 0.732
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.7867s0841.1.p Homeodomain 453 508
Bostr.7867s0841.2.p Homeodomain 280 335

Links

Other Homeodomain family TFs
Other Boechera stricta TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.011G058300 Gossypium raimondii Gorai.011G058300 N
cassava31568.valid.m1 Manihot esculenta cassava31568.valid.m1 N
Cucsa.360310 Cucumis sativus Cucsa.360310 N
mgf013194m Mimulus guttatus mgf013194m N
Bostr.10273s0086 Boechera stricta Bostr.10273s0086 N
Bostr.7128s0357 Boechera stricta Bostr.7128s0357 N
Cagra.0824s0115 Capsella grandiflora Cagra.0824s0115 N
Cagra.1013s0036 Capsella grandiflora Cagra.1013s0036 N
Carubv10012426m.g Capsella rubella Carubv10012426m.g N
Carubv10019876m.g Capsella rubella Carubv10019876m.g N
Ciclev10025094m.g Citrus clementina Ciclev10025094m.g N
Eucgr.J02823 Eucalyptus grandis Eucgr.J02823 N
evm.TU.supercontig_25.106 Carica papaya evm.TU.supercontig_25.106 N
cassava159.valid.m1 Manihot esculenta cassava159.valid.m1 N
Lus10015664.g Linum usitatissimum Lus10015664.g N
Lus10037678.g Linum usitatissimum Lus10037678.g N
orange1.1g006062m.g Citrus sinensis orange1.1g006062m.g N
Pavir.Aa00316 Panicum virgatum Pavir.Aa00316 N
Pavir.J06110 Panicum virgatum Pavir.J06110 N
SapurV1A.0002s0820 Salix purpurea SapurV1A.0002s0820 N
SapurV1A.0177s0370 Salix purpurea SapurV1A.0177s0370 N
SapurV1A.5380s0010 Salix purpurea SapurV1A.5380s0010 N
Thhalv10007199m.g Eutrema salsugineum Thhalv10007199m.g N
Thhalv10018282m.g Eutrema salsugineum Thhalv10018282m.g N
PK02666.1 Cannabis sativa PK02666.1 N
PDK_20s1505221g001 Phoenix dactylifera PDK_20s1505221g001 N
ONIVA02G36570 Oryza nivara ONIVA02G36570 N
TRFL6 Arabidopsis thaliana AT1G72650 N
BGIOSGA009134 Oryza indica BGIOSGA009134 N
Bra016044 Brassica rapa Bra016044 N
BRADI3G57300 Brachypodium distachyon BRADI3G57300 N
TRFL6 Arabidopsis lyrata fgenesh2_kg.2__1530__AT1G72650.2 N
GLYMA07G04160 Glycine max GLYMA07G04160 N
GLYMA16G00870 Glycine max GLYMA16G00870 N
GRMZM2G049194 Zea mays GRMZM2G049194 N
LPERR02G28410 Leersia perrieri LPERR02G28410 N
OB02G41350 Oryza brachyantha OB02G41350 N
OBART02G34530 Oryza barthii OBART02G34530 N
OGLUM02G35670 Oryza glumaepatula OGLUM02G35670 N
AMTR_s00009p00103030 Amborella trichopoda AMTR_s00009p00103030 N
ORGLA02G0298600 Oryza glaberrima ORGLA02G0298600 N
ORUFI02G36040 Oryza rufipogon ORUFI02G36040 N
OS02G0776700 Oryza sativa OS02G0776700 N
PGSC0003DMG400002481 Solanum tuberosum PGSC0003DMG400002481 N
POPTR_0001s17020 Populus trichocarpa POPTR_0001s17020 N
POPTR_0003s06240 Populus trichocarpa POPTR_0003s06240 N
Sb04g034770 Sorghum bicolor Sb04g034770 N
Si016649m.g Setaria italica Si016649m.g N
TCM_029115 Theobroma cacao TCM_029115 N
VIT_09s0002g01480 Vitis vinifera VIT_09s0002g01480 N
29706.m001295 Ricinus communis 29706.m001295 N