Eucgr.A01715 (Eucalyptus grandis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Eucgr.A01715 T228439_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.831 0.895
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.831 0.895
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.831 0.895
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.831 0.895
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.824 0.737
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.824 0.737
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.809 0.754
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.808 0.772
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.808 0.772
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.808 0.772
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.793 0.719
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.793 0.719
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.790 0.632
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.766 0.702
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.766 0.702
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.A01715.1 Homeodomain 101 157
Eucgr.A01715.2 Homeodomain 101 157
Eucgr.A01715.3 Homeodomain 101 157

Links

Other Homeodomain family TFs
Other Eucalyptus grandis TFs

616 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AFAF009626 Anopheles farauti AFAF009626 I 0.000
LDEC012804 Leptinotarsa decemlineata LDEC012804 I 0.000
AALB003178 Anopheles albimanus AALB003178 I 0.000
AARA011500 Anopheles arabiensis AARA011500 I 0.000
ACHR000367 Anopheles christyi ACHR000367 I 0.000
ACOM033000 Anopheles coluzzii ACOM033000 I 0.000
ACUA016345 Anopheles culicifacies ACUA016345 I 0.000
ADIR002616 Anopheles dirus ADIR002616 I 0.000
AEPI003935 Anopheles epiroticus AEPI003935 I 0.000
Myotis_brandtii_TMEM38B_10031594 Myotis brandtii Myotis_brandtii_TMEM38B_10031594 I 0.000
AFUN001469 Anopheles funestus AFUN001469 I 0.000
AMAM004582 Anopheles maculatus AMAM004582 I 0.000
AMEC016032 Anopheles melas AMEC016032 I 0.000
AMEM008015 Anopheles merus AMEM008015 I 0.000
AMIN002999 Anopheles minimus AMIN002999 I 0.000
AQUA006236 Anopheles quadriannulatus AQUA006236 I 0.000
ASTEI11387 Anopheles stephensi ASTEI11387 I 0.000
LLOJ006043 Lutzomyia longipalpis LLOJ006043 I 0.000
MCINX015509 Melitaea cinxia MCINX015509 I 0.000
AAEL010472 Aedes aegypti AAEL010472 I 0.000
ACEP26870 Atta cephalotes ACEP26870 I 0.000
BGIBMGA013959 Bombyx mori BGIBMGA013959 I 0.000
CPIJ014602 Culex quinquefasciatus CPIJ014602 I 0.000
LYL1 Ochotona princeps ENSOPRG00000009458 I 0.000
GB40906 Apis mellifera GB40906 I 0.000
KGM_01922 Danaus plexippus KGM_01922 I 0.000
L798_06639 Zootermopsis nevadensis L798_06639 I 0.000
CpipJ_CPIJ014602 Culex pipiens CpipJ_CPIJ014602 I 0.000
SINV21956 Solenopsis invicta SINV21956 I 0.000
TC009117 Tribolium castaneum TC009117 I 0.000
Afo_R010378 Aptenodytes forsteri Afo_R010378 I 0.000
Cflo_01951--XP_001121011.1_APIME Camponotus floridanus Cflo_01951--XP_001121011.1_APIME I 0.000
Hsal_07700--XP_001121011.1_APIME Harpegnathos saltator Hsal_07700--XP_001121011.1_APIME I 0.000
PHUM038940 Pediculus humanus PHUM038940 N 0.000
RPRC000013 Rhodnius prolixus RPRC000013 N 0.000