chr1.CM0442.170.nd (Lotus japonicus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 chr1.CM0442.170.nd T230803_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0442.170.nd Homeodomain 257 309

Links

Other Homeodomain family TFs
Other Lotus japonicus TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.743
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.724
Cla021272 Citrullus lanatus Cla021272 N 0.712
Pm004594 Prunus mume Pm004594 N 0.732
29848.m004652 Ricinus communis 29848.m004652 N 0.768
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.705
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.712
mgf000632m Mimulus guttatus mgf000632m N 0.603
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.676
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.713
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.726
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.726
TCM_038389 Theobroma cacao TCM_038389 N 0.724
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.635
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.701
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.681
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.650
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.670
MDP0000119866 Malus domestica MDP0000119866 N 0.707
MDP0000202143 Malus domestica MDP0000202143 N 0.696
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.743
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N 0.631
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.716
PK00680.1 Cannabis sativa PK00680.1 N 0.731
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.601
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.601
Bo9g171420 Brassica oleracea Bo9g171420 N 0.716
Bra008975 Brassica rapa Bra008975 N 0.716
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.634
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.726
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.818
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.818
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.624
MTR_3g107530 Medicago truncatula MTR_3g107530 N 0.628
OB06G27850 Oryza brachyantha OB06G27850 N 0.622
OBART06G20210 Oryza barthii OBART06G20210 N 0.601
OCP3 Arabidopsis thaliana AT5G11270 N 0.726
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.601
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.603
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.601
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.603
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.601
OS06G0601000 Oryza sativa OS06G0601000 N 0.601
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.620
POPTR_0006s26790 Populus trichocarpa POPTR_0006s26790 N 0.671
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.732
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.607