AATE000766 (Anopheles atroparvus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 AATE000766 T231240_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six3
M00483_2.00 		Mus musculus
NNNAYMN
NKRTNNN		 PBM
Berger et al.(2008)
Six3_1732 		0.867 0.982
SIX3
M05159_2.00 		Homo sapiens
NNYGATABBN
NVVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_HT-SELEX 		0.867 0.982
SIX3
M10698_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX3_Q6 		0.867 0.982
SIX3
M05160_2.00 		Homo sapiens
NNYGATABVB
VBVTATCRNN		 SELEX
Yin et al.(2017)
SIX3_eDBD_Methyl-HT-SELEX 		0.867 0.982
Optix
M02124_2.00 		Drosophila melanogaster
NNNNNDATMN
NKATHNNNNN		 PBM
Weirauch et al.(2014)
pTH5437 		0.867 0.965
Optix
M03850_2.00 		Drosophila melanogaster
TAATYTAATTA
TAATTARATTA		 SELEX
Nitta et al.(2015)
Optix_1 		0.867 0.965
Optix
M06526_2.00 		Drosophila melanogaster
TGATA
TATCA		 B1H
Mathelier et al.(2014)
MA0199.1 		0.867 0.965
Optix
M06327_2.00 		Drosophila melanogaster
HHVTGATA
TATCABDD		 B1H
Zhu et al.(2011)
Optix_Cell_FBgn0025360 		0.867 0.965
Optix
M06328_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
Optix_SOLEXA_FBgn0025360 		0.867 0.965
SIX6
M00326_2.00 		Homo sapiens
NNDATMB
VKATHNN		 PBM
Barrera et al.(2016)
SIX6_REF 		0.865 0.965
Six6
M00169_2.00 		Mus musculus
NNAYMNN
NNKRTNN		 PBM
Badis et al.(2009)
Six6_2267 		0.865 0.965
Six6
M00412_2.00 		Mus musculus
NNNTGATAYCN
NGRTATCANNN		 PBM
Berger et al.(2008)
Six6_2267 		0.865 0.965
SIX6
M05357_2.00 		Homo sapiens
NNYGATASVB
VBSTATCRNN		 SELEX
Yin et al.(2017)
SIX6_eDBD_HT-SELEX 		0.865 0.965
SIX6
M00325_2.00 		Homo sapiens
NNNDATMB
VKATHNNN		 PBM
Barrera et al.(2016)
SIX6_H141N 		0.865 0.965
SIX6
M05358_2.00 		Homo sapiens
VBVYAYCRNN
NNYGRTRBVB		 SELEX
Yin et al.(2017)
SIX6_eDBD_Methyl-HT-SELEX 		0.865 0.965
six3
M02102_2.00 		Oryzias latipes
NNDAYMBNNN
NNNVKRTHNN		 PBM
Weirauch et al.(2014)
pTH5928 		0.865 0.947
SIX6
M00327_2.00 		Homo sapiens
NHDAYMBNN
NNVKRTHDN		 PBM
Barrera et al.(2016)
SIX6_T165A 		0.859 0.947
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AATE000766-PA Homeodomain 160 216

Links

Other Homeodomain family TFs
Other Anopheles atroparvus TFs

296 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hba_14958 Heterorhabditis bacteriophora Hba_14958 I 0.000
TELCIR_07363 Teladorsagia circumcincta TELCIR_07363 I 0.000
TELCIR_05080 Teladorsagia circumcincta TELCIR_05080 I 0.000
OESDEN_02652 Oesophagostomum dentatum OESDEN_02652 I 0.000
NECAME_12696 Necator americanus NECAME_12696 I 0.000
NBR_0001432001 Nippostrongylus brasiliensis NBR_0001432001 I 0.000
MhA1_Contig984.frz3.gene20 Meloidogyne hapla MhA1_Contig984.frz3.gene20 I 0.000
L898_g10316 Steinernema monticolum L898_g10316 I 0.000
L889_g8361 Steinernema feltiae L889_g8361 I 0.000
L596_g25297 Steinernema carpocapsae L596_g25297 I 0.000
HPLM_0001680701 Haemonchus placei HPLM_0001680701 I 0.000
HPBE_0001043101 Heligmosomoides bakeri HPBE_0001043101 I 0.000
HCOI01406200 Haemonchus contortus HCOI01406200 I 0.000
HCOI00769300 Haemonchus contortus HCOI00769300 I 0.000
CBG19594 Caenorhabditis briggsae CBG19594 I 0.000
GPLIN_000268400 Globodera pallida GPLIN_000268400 I 0.000
DME_0000742401 Dracunculus medinensis DME_0000742401 I 0.000
DICVIV_02348 Dictyocaulus viviparus DICVIV_02348 I 0.000
BXY_1600300 Bursaphelenchus xylophilus BXY_1600300 I 0.000
ANCCEY_03357 Ancylostoma ceylanicum ANCCEY_03357 I 0.000
ACOC_0001326501 Angiostrongylus costaricensis ACOC_0001326501 I 0.000
ACAC_0000239001 Angiostrongylus cantonensis ACAC_0000239001 I 0.000
nhr-119 Caenorhabditis elegans WBGene00003709 I 0.000
CRE06661 Caenorhabditis remanei CRE06661 I 0.000
CBN31048 Caenorhabditis brenneri CBN31048 I 0.000
ASU_09451 Ascaris suum ASU_09451 N 0.000
CBN25890 Caenorhabditis brenneri CBN25890 N 0.000