ADIR002306 (Anopheles dirus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 ADIR002306 T231554_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Six4
M00563_2.00 		Drosophila melanogaster
NNDANMHNN
NNDKNTHNN		 PBM
Busser et al.(2012a)
Six4 		0.861 0.962
Six4
M06530_2.00 		Drosophila melanogaster
TGABAC
GTVTCA		 B1H
Mathelier et al.(2014)
MA0204.1 		0.861 0.962
Six4
M06334_2.00 		Drosophila melanogaster
WDDTGABAC
GTVTCAHHW		 B1H
Zhu et al.(2011)
Six4_Cell_FBgn0027364 		0.861 0.962
Six4
M06335_2.00 		Drosophila melanogaster
NTGAKACB
VGTMTCAN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_2_FBgn0027364 		0.861 0.962
Six4
M06336_2.00 		Drosophila melanogaster
NNNTGABA
TVTCANNN		 B1H
Zhu et al.(2011)
Six4_SOLEXA_FBgn0027364 		0.861 0.962
SIX5
M08208_2.00 		Homo sapiens
GARWTGTAGT
ACTACAWYTC		 ChIP-seq
Contrino et al.(2012)
Mv121 		0.848 0.811
SIX5
M08209_2.00 		Homo sapiens
GGAGTTGT
ACAACTCC		 ChIP-seq
Contrino et al.(2012)
Mv123 		0.848 0.811
SIX5
M10738_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_01 		0.848 0.811
SIX5
M10739_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX5_02 		0.848 0.811
Six4
M00461_2.00 		Mus musculus
NNKABMHNN
NNDKVTMNN		 PBM
Berger et al.(2008)
Six4_2860 		0.827 0.792
SIX4
M04939_2.00 		Homo sapiens
NVYGATACVB
VBGTATCRBN		 SELEX
Yin et al.(2017)
SIX4_eDBD_HT-SELEX 		0.827 0.792
Six4
M09198_2.00 		Mus musculus
DGDAABHNSASNNN
NNNSTSNDVTTHCH		 Misc
Kulakovskiy et al.(2013)
SIX4_MOUSE.H11MO.0.C 		0.827 0.792
SIX4
M10646_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX4_Q3 		0.827 0.792
SIX4
M04940_2.00 		Homo sapiens
NBGTAWCRHN
NDYGWTACVN		 SELEX
Yin et al.(2017)
SIX4_eDBD_Methyl-HT-SELEX 		0.827 0.792
so
M02117_2.00 		Drosophila melanogaster
NDATMYNNN
NNNRKATHN		 PBM
Weirauch et al.(2014)
pTH5690 		0.708 0.717
so
M03800_2.00 		Drosophila melanogaster
NYGATAYB
VRTATCRN		 SELEX
Nitta et al.(2015)
so_1 		0.708 0.717
so
M03801_2.00 		Drosophila melanogaster
YKATAYNNNYGATAY
RTATCRNNNRTATMR		 SELEX
Nitta et al.(2015)
so_2 		0.708 0.717
so
M03802_2.00 		Drosophila melanogaster
YGATACGTATCR
YGATACGTATCR		 SELEX
Nitta et al.(2015)
so_3 		0.708 0.717
so
M03803_2.00 		Drosophila melanogaster
RTATCRYGATAC
GTATCRYGATAY		 SELEX
Nitta et al.(2015)
so_4 		0.708 0.717
so
M06497_2.00 		Drosophila melanogaster
TGATAC
GTATCA		 B1H
Mathelier et al.(2014)
MA0246.1 		0.708 0.717
so
M06268_2.00 		Drosophila melanogaster
NRTGATA
TATCAYN		 B1H
Zhu et al.(2011)
So_Cell_FBgn0003460 		0.708 0.717
so
M06269_2.00 		Drosophila melanogaster
NNNTGATA
TATCANNN		 B1H
Zhu et al.(2011)
So_SOLEXA_FBgn0003460 		0.708 0.717
Six2
M00425_2.00 		Mus musculus
NNAYMYNN
NNRKRTNN		 PBM
Berger et al.(2008)
Six2_2307 		0.708 0.698
Six1
M00512_2.00 		Mus musculus
NNDATMYNNN
NNNRKATHNN		 PBM
Berger et al.(2008)
Six1_0935 		0.708 0.698
SIX1
M05094_2.00 		Homo sapiens
NNYGATACVB
VBGTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_HT-SELEX 		0.708 0.698
SIX1
M05096_2.00 		Homo sapiens
NNYGATAYVB
VBRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_HT-SELEX 		0.708 0.698
SIX2
M05285_2.00 		Homo sapiens
NNYGATACSB
VSGTATCRNN		 SELEX
Yin et al.(2017)
SIX2_eDBD_HT-SELEX 		0.708 0.698
SIX2
M05287_2.00 		Homo sapiens
NSGTRWCRYN
NRYGWYACSN		 SELEX
Yin et al.(2017)
SIX2_FL_HT-SELEX 		0.708 0.698
SIX1
M08130_2.00 		Homo sapiens
GWAACCTGANM
KNTCAGGTTWC		 ChIP-seq
Mathelier et al.(2014)
MA1118.1 		0.708 0.698
SIX2
M08133_2.00 		Homo sapiens
NNNTGWAACCTGAKMH
DKMTCAGGTTWCANNN		 ChIP-seq
Mathelier et al.(2014)
MA1119.1 		0.708 0.698
SIX1
M09142_2.00 		Homo sapiens
DGWAAYHTGABMYN
NRKVTCADRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX1_HUMAN.H11MO.0.A 		0.708 0.698
SIX2
M09157_2.00 		Homo sapiens
DGWAAYHHGABMH
DKVTCDDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_HUMAN.H11MO.0.A 		0.708 0.698
Six2
M09185_2.00 		Mus musculus
DGWAAYHYRABMYB
VRKVTYRDRTTWCH		 Misc
Kulakovskiy et al.(2013)
SIX2_MOUSE.H11MO.0.A 		0.708 0.698
Six1
M09579_2.00 		Mus musculus
GWAAYHTGABMH
DKVTCADRTTWC		 Misc
Heinz et al.(2010)
Myoblast-Six1_GSE20150 		0.708 0.698
SIX1
M10684_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3_01 		0.708 0.698
SIX1
M10685_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SIX1_Q3 		0.708 0.698
SIX1
M05095_2.00 		Homo sapiens
NNYGATABNB
VNVTATCRNN		 SELEX
Yin et al.(2017)
SIX1_eDBD_Methyl-HT-SELEX 		0.708 0.698
SIX1
M05097_2.00 		Homo sapiens
NNYGATAYSB
VSRTATCRNN		 SELEX
Yin et al.(2017)
SIX1_FL_Methyl-HT-SELEX 		0.708 0.698
SIX2
M05286_2.00 		Homo sapiens
NBRTATCRNN
NNYGATAYVN		 SELEX
Yin et al.(2017)
SIX2_eDBD_Methyl-HT-SELEX 		0.708 0.698
SIX2
M05288_2.00 		Homo sapiens
VBRTAWCRNN
NNYGWTAYVB		 SELEX
Yin et al.(2017)
SIX2_FL_Methyl-HT-SELEX 		0.708 0.698
ceh-34
M00672_2.00 		Caenorhabditis elegans
NNNRDAWNNN
NNNWTHYNNN		 PBM
Narasimhan et al.(2015)
pTH9708 		0.633 0.547
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ADIR002306-PA Homeodomain 319 371

Links

Other Homeodomain family TFs
Other Anopheles dirus TFs

541 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMAM001181 Anopheles maculatus AMAM001181 N 0.000
ACOM030968 Anopheles coluzzii ACOM030968 N 0.000
ACUA001624 Anopheles culicifacies ACUA001624 N 0.000
ACUA013501 Anopheles culicifacies ACUA013501 N 0.000
ADIR000747 Anopheles dirus ADIR000747 N 0.000
ADIR000749 Anopheles dirus ADIR000749 N 0.000
AEPI000388 Anopheles epiroticus AEPI000388 N 0.000
AEPI000391 Anopheles epiroticus AEPI000391 N 0.000
AFAF015377 Anopheles farauti AFAF015377 N 0.000
AFAF016537 Anopheles farauti AFAF016537 N 0.000
AFUN010324 Anopheles funestus AFUN010324 N 0.000
AFUN010327 Anopheles funestus AFUN010327 N 0.000
ACOM030952 Anopheles coluzzii ACOM030952 N 0.000
AMAM021192 Anopheles maculatus AMAM021192 N 0.000
AMEC002017 Anopheles melas AMEC002017 N 0.000
AMEC011119 Anopheles melas AMEC011119 N 0.000
AMEM007634 Anopheles merus AMEM007634 N 0.000
AMEM014363 Anopheles merus AMEM014363 N 0.000
AMIN006409 Anopheles minimus AMIN006409 N 0.000
AQUA003680 Anopheles quadriannulatus AQUA003680 N 0.000
AQUA014420 Anopheles quadriannulatus AQUA014420 N 0.000
ASIS001250 Anopheles sinensis ASIS001250 N 0.000
ASTEI01637 Anopheles stephensi ASTEI01637 N 0.000
nLs.2.1.2.g01927 Litomosoides sigmodontis nLs.2.1.2.g01927 N 0.000
TC003170 Tribolium castaneum TC003170 N 0.000
AAEL001652 Aedes aegypti AAEL001652 N 0.000
ACEP11448 Atta cephalotes ACEP11448 N 0.000
ADAC000872 Anopheles darlingi ADAC000872 N 0.000
AGAP007822 Anopheles gambiae AGAP007822 N 0.000
AGAP007824 Anopheles gambiae AGAP007824 N 0.000
CPIJ000953 Culex quinquefasciatus CPIJ000953 N 0.000
DAPPUDRAFT_45040 Daphnia pulex DAPPUDRAFT_45040 N 0.000
GB41320 Apis mellifera GB41320 N 0.000
ISCW003677 Ixodes scapularis ISCW003677 N 0.000
L798_14385 Zootermopsis nevadensis L798_14385 N 0.000
SINV12291 Solenopsis invicta SINV12291 N 0.000
CpipJ_CPIJ000953 Culex pipiens CpipJ_CPIJ000953 N 0.000
YQE_07457 Dendroctonus ponderosae YQE_07457 N 0.000
Cflo_10835--XP_001121050.1_APIME Camponotus floridanus Cflo_10835--XP_001121050.1_APIME N 0.000
Hsal_11851--XP_001121050.1_APIME Harpegnathos saltator Hsal_11851--XP_001121050.1_APIME N 0.000
LDEC024027 Leptinotarsa decemlineata LDEC024027 N 0.000
AALB001157 Anopheles albimanus AALB001157 N 0.000
AARA012018 Anopheles arabiensis AARA012018 N 0.000
AARA012021 Anopheles arabiensis AARA012021 N 0.000
AATE014155 Anopheles atroparvus AATE014155 N 0.000
AATE016471 Anopheles atroparvus AATE016471 N 0.000
ACHR000531 Anopheles christyi ACHR000531 N 0.000
ACHR003205 Anopheles christyi ACHR003205 N 0.000