D915_03856 (Fasciola hepatica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 D915_03856 T233426_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irx4
M00416_2.00 		Mus musculus
NNNDAMAH
DTKTHNNN		 PBM
Berger et al.(2008)
Irx4_2242 		0.853 0.929
ara
M06518_2.00 		Drosophila melanogaster
WWACA
TGTWW		 B1H
Mathelier et al.(2014)
MA0210.1 		0.800 0.911
ara
M06313_2.00 		Drosophila melanogaster
TGTWWWNN
NNWWWACA		 B1H
Zhu et al.(2011)
Ara_Cell_FBgn0015904 		0.800 0.911
ara
M06314_2.00 		Drosophila melanogaster
DWWACA
TGTWWH		 B1H
Zhu et al.(2011)
Ara_SOLEXA_FBgn0015904 		0.800 0.911
Irx6
M00456_2.00 		Mus musculus
NNDAHWN
NWDTHNN		 PBM
Berger et al.(2008)
Irx6_2623 		0.800 0.893
caup
M06519_2.00 		Drosophila melanogaster
WAACA
TGTTW		 B1H
Mathelier et al.(2014)
MA0217.1 		0.792 0.875
caup
M06315_2.00 		Drosophila melanogaster
HWDWAACA
TGTTWHWD		 B1H
Zhu et al.(2011)
Caup_Cell_FBgn0015919 		0.792 0.875
caup
M06316_2.00 		Drosophila melanogaster
NDDACA
TGTHHN		 B1H
Zhu et al.(2011)
Caup_SOLEXA_FBgn0015919 		0.792 0.875
Irx2
M00386_2.00 		Mus musculus
NNDACAHNN
NNDTGTHNN		 PBM
Berger et al.(2008)
Irx2_0900 		0.780 0.857
Irx5
M00455_2.00 		Mus musculus
NNNDACAHN
NDTGTHNNN		 PBM
Berger et al.(2008)
Irx5_2385 		0.780 0.857
IRX2
M03212_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX2_1 		0.780 0.857
IRX5
M03222_2.00 		Homo sapiens
NDACAYRACAHN
NDTGTYRTGTHN		 SELEX
Jolma et al.(2013)
IRX5_1 		0.780 0.857
IRX5
M05315_2.00 		Homo sapiens
NBDTGTHNDACAYVN
NBRTGTHNDACAHVN		 SELEX
Yin et al.(2017)
IRX5_eDBD_HT-SELEX 		0.780 0.857
IRX5
M05316_2.00 		Homo sapiens
WYRYGHHNHAYRYRY
RYRYRTDNDDCRYRW		 SELEX
Yin et al.(2017)
IRX5_eDBD_Methyl-HT-SELEX 		0.780 0.857
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
D915_03856 Homeodomain 493 551

Links

Other Homeodomain family TFs
Other Fasciola hepatica TFs

385 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TGA9 Arabidopsis thaliana AT1G08320 D 0.000
POPTR_0003s19410 Populus trichocarpa POPTR_0003s19410 I 0.000
PK08582.1 Cannabis sativa PK08582.1 I 0.000
PRUPE_ppa019842mg Prunus persica PRUPE_ppa019842mg I 0.000
Sb03g037560 Sorghum bicolor Sb03g037560 I 0.000
SELMODRAFT_231344 Selaginella moellendorffii SELMODRAFT_231344 I 0.000
Si001292m.g Setaria italica Si001292m.g I 0.000
Solyc05g009660.2 Solanum lycopersicum Solyc05g009660.2 I 0.000
Solyc06g074320.2 Solanum lycopersicum Solyc06g074320.2 I 0.000
Pm029028 Prunus mume Pm029028 I 0.000
Bostr.25219s0112 Boechera stricta Bostr.25219s0112 I 0.000
Cagra.4395s0022 Capsella grandiflora Cagra.4395s0022 I 0.000
Carubv10011576m.g Capsella rubella Carubv10011576m.g I 0.000
Ciclev10028428m.g Citrus clementina Ciclev10028428m.g I 0.000
Eucgr.A02436 Eucalyptus grandis Eucgr.A02436 I 0.000
gene14220-v1.0-hybrid Fragaria vesca gene14220-v1.0-hybrid I 0.000
MDP0000145555 Malus domestica MDP0000145555 I 0.000
MDP0000250967 Malus domestica MDP0000250967 I 0.000
MDP0000301884 Malus domestica MDP0000301884 I 0.000
orange1.1g036039m.g Citrus sinensis orange1.1g036039m.g I 0.000
Pavir.Eb03507 Panicum virgatum Pavir.Eb03507 I 0.000
Pavir.J04905 Panicum virgatum Pavir.J04905 I 0.000
Pavir.J27823 Panicum virgatum Pavir.J27823 I 0.000
SapurV1A.0009s1200 Salix purpurea SapurV1A.0009s1200 I 0.000
SapurV1A.0574s0080 Salix purpurea SapurV1A.0574s0080 I 0.000
Thhalv10007490m.g Eutrema salsugineum Thhalv10007490m.g I 0.000
AMTR_s00022p00217850 Amborella trichopoda AMTR_s00022p00217850 I 0.000
OB01G43330 Oryza brachyantha OB01G43330 I 0.000
BGIOSGA007726 Oryza indica BGIOSGA007726 I 0.000
Bo5g008940 Brassica oleracea Bo5g008940 I 0.000
Bo8g112540 Brassica oleracea Bo8g112540 I 0.000
Bra018634 Brassica rapa Bra018634 I 0.000
Bra031622 Brassica rapa Bra031622 I 0.000
fgenesh1_pm.C_scaffold_1000665 Arabidopsis lyrata fgenesh1_pm.C_scaffold_1000665 I 0.000
GLYMA02G30220 Glycine max GLYMA02G30220 I 0.000
GLYMA10G11985 Glycine max GLYMA10G11985 I 0.000
GLYMA12G30990 Glycine max GLYMA12G30990 I 0.000
GRMZM2G019907 Zea mays GRMZM2G019907 I 0.000
GRMZM2G125243 Zea mays GRMZM2G125243 I 0.000
GSMUA_Achr3G11150_001 Musa acuminata GSMUA_Achr3G11150_001 I 0.000
GSMUA_Achr9G27700_001 Musa acuminata GSMUA_Achr9G27700_001 I 0.000
MTR_0126s0080 Medicago truncatula MTR_0126s0080 I 0.000
PGSC0003DMG400012962 Solanum tuberosum PGSC0003DMG400012962 I 0.000
OBART02G07230 Oryza barthii OBART02G07230 I 0.000
OGLUM02G07240 Oryza glumaepatula OGLUM02G07240 I 0.000
OLONG_010393 Oryza longistaminata OLONG_010393 I 0.000
OMERI02G08300 Oryza meridionalis OMERI02G08300 I 0.000
ONIVA02G08860 Oryza nivara ONIVA02G08860 I 0.000
OPUNC02G06400 Oryza punctata OPUNC02G06400 I 0.000
ORGLA02G0067600 Oryza glaberrima ORGLA02G0067600 I 0.000
OS02G0194900 Oryza sativa OS02G0194900 I 0.000
OB05G28710 Oryza brachyantha OB05G28710 N 0.000
fgenesh1_pm.scaffold_257000017 Physcomitrella patens fgenesh1_pm.scaffold_257000017 N 0.000
fgenesh1_pg.scaffold_30000177 Physcomitrella patens fgenesh1_pg.scaffold_30000177 N 0.000
estExt_gwp_gw1.C_1260170 Physcomitrella patens estExt_gwp_gw1.C_1260170 N 0.000
Ca_07292 Cicer arietinum Ca_07292 N 0.000