irf6 (Danio rerio)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSDARG00000101986 T244021_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.886 0.886
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.876 0.876
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.876 0.876
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.876 0.876
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.876 0.876
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.876 0.876
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.876 0.876
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.857 0.857
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000132270 IRF 9 114
ENSDARP00000139404 IRF 9 114

Links

Other IRF family TFs
Other Danio rerio TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PILCRDRAFT_821899 Piloderma croceum PILCRDRAFT_821899 N
M404DRAFT_853889 Pisolithus tinctorius M404DRAFT_853889 N
M413DRAFT_170047 Hebeloma cylindrosporum M413DRAFT_170047 N
Moror_5897 Moniliophthora roreri Moror_5897 N
Moror_6337 Moniliophthora roreri Moror_6337 N
MPER_15625 Moniliophthora perniciosa MPER_15625 N
PAXRUDRAFT_316341 Paxillus rubicundulus PAXRUDRAFT_316341 N
PHACADRAFT_146309 Phanerochaete carnosa PHACADRAFT_146309 N
PHACADRAFT_262581 Phanerochaete carnosa PHACADRAFT_262581 N
PHLGIDRAFT_127046 Phlebiopsis gigantea PHLGIDRAFT_127046 N
PHLGIDRAFT_80941 Phlebiopsis gigantea PHLGIDRAFT_80941 N
PILCRDRAFT_672544 Piloderma croceum PILCRDRAFT_672544 N
M404DRAFT_141478 Pisolithus tinctorius M404DRAFT_141478 N
PISMIDRAFT_674680 Pisolithus microcarpus PISMIDRAFT_674680 N
PISMIDRAFT_679206 Pisolithus microcarpus PISMIDRAFT_679206 N
PLEOSDRAFT_1104780 Pleurotus ostreatus PLEOSDRAFT_1104780 N
SCHCODRAFT_236631 Schizophyllum commune SCHCODRAFT_236631 N
SCHCODRAFT_81806 Schizophyllum commune SCHCODRAFT_81806 N
SCLCIDRAFT_1212689 Scleroderma citrinum SCLCIDRAFT_1212689 N
SCLCIDRAFT_1222770 Scleroderma citrinum SCLCIDRAFT_1222770 N
SERLA73DRAFT_163336 Serpula lacrymans SERLA73DRAFT_163336 N
fgenesh1_pg.C_scaffold_8000500 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000500 N
fgenesh1_pg.C_scaffold_8000526 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000526 N
GLOTRDRAFT_43577 Gloeophyllum trabeum GLOTRDRAFT_43577 N
AGABI2DRAFT_204681 Agaricus bisporus AGABI2DRAFT_204681 N
CC1G_08004 Coprinopsis cinerea CC1G_08004 N
CERSUDRAFT_94391 Ceriporiopsis subvermispora CERSUDRAFT_94391 N
CY34DRAFT_799919 Suillus luteus CY34DRAFT_799919 N
CY34DRAFT_810199 Suillus luteus CY34DRAFT_810199 N
CY34DRAFT_92559 Suillus luteus CY34DRAFT_92559 N
FIBRA_01765 Fibroporia radiculosa FIBRA_01765 N
FOMPIDRAFT_1027511 Fomitopsis pinicola FOMPIDRAFT_1027511 N
FOMPIDRAFT_112416 Fomitopsis pinicola FOMPIDRAFT_112416 N
GALMADRAFT_156783 Galerina marginata GALMADRAFT_156783 N
AGABI2DRAFT_194007 Agaricus bisporus AGABI2DRAFT_194007 N
GLOTRDRAFT_44070 Gloeophyllum trabeum GLOTRDRAFT_44070 N
GYMLUDRAFT_181224 Gymnopus luxurians GYMLUDRAFT_181224 N
HETIRDRAFT_317558 Heterobasidion irregulare HETIRDRAFT_317558 N
HYDPIDRAFT_137903 Hydnomerulius pinastri HYDPIDRAFT_137903 N
HYDPIDRAFT_181816 Hydnomerulius pinastri HYDPIDRAFT_181816 N
JAAARDRAFT_207038 Jaapia argillacea JAAARDRAFT_207038 N
JAAARDRAFT_66445 Jaapia argillacea JAAARDRAFT_66445 N
K443DRAFT_671578 Laccaria amethystina K443DRAFT_671578 N
K443DRAFT_672954 Laccaria amethystina K443DRAFT_672954 N
LACBIDRAFT_316437 Laccaria bicolor LACBIDRAFT_316437 N