ENSGMOG00000007264 (Gadus morhua)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSGMOG00000007264 T244120_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.817 0.817
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.808 0.808
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.808 0.808
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.788 0.788
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.788 0.788
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.788 0.788
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.788 0.788
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.788 0.788
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.769 0.769
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.740 0.740
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.740 0.740
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.740 0.740
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.740 0.740
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.740 0.740
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.740 0.740
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.740 0.740
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.740 0.740
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGMOP00000007757 IRF 10 114

Links

Other IRF family TFs
Other Gadus morhua TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30037004m.g Saccoglossus kowalevskii Sakowv30037004m.g I
Sakowv30037007m.g Saccoglossus kowalevskii Sakowv30037007m.g I
Sakowv30037050m.g Saccoglossus kowalevskii Sakowv30037050m.g I
Sakowv30037045m.g Saccoglossus kowalevskii Sakowv30037045m.g I
Sakowv30037039m.g Saccoglossus kowalevskii Sakowv30037039m.g I
Sakowv30037015m.g Saccoglossus kowalevskii Sakowv30037015m.g I
Sakowv30037029m.g Saccoglossus kowalevskii Sakowv30037029m.g N
Sakowv30037006m.g Saccoglossus kowalevskii Sakowv30037006m.g N
Sakowv30037008m.g Saccoglossus kowalevskii Sakowv30037008m.g N
Sakowv30037009m.g Saccoglossus kowalevskii Sakowv30037009m.g N
Sakowv30037011m.g Saccoglossus kowalevskii Sakowv30037011m.g N
Sakowv30037024m.g Saccoglossus kowalevskii Sakowv30037024m.g N
Sakowv30037025m.g Saccoglossus kowalevskii Sakowv30037025m.g N
Sakowv30037005m.g Saccoglossus kowalevskii Sakowv30037005m.g N
Sakowv30037033m.g Saccoglossus kowalevskii Sakowv30037033m.g N
Sakowv30037034m.g Saccoglossus kowalevskii Sakowv30037034m.g N
Sakowv30037051m.g Saccoglossus kowalevskii Sakowv30037051m.g N
Sakowv30037052m.g Saccoglossus kowalevskii Sakowv30037052m.g N
Sakowv30037056m.g Saccoglossus kowalevskii Sakowv30037056m.g N
Sakowv30036994m.g Saccoglossus kowalevskii Sakowv30036994m.g N
Sakowv30034955m.g Saccoglossus kowalevskii Sakowv30034955m.g N
Sakowv30034956m.g Saccoglossus kowalevskii Sakowv30034956m.g N
Sakowv30034957m.g Saccoglossus kowalevskii Sakowv30034957m.g N
Sakowv30034959m.g Saccoglossus kowalevskii Sakowv30034959m.g N
Sakowv30034960m.g Saccoglossus kowalevskii Sakowv30034960m.g N
Sakowv30034963m.g Saccoglossus kowalevskii Sakowv30034963m.g N
Sakowv30034965m.g Saccoglossus kowalevskii Sakowv30034965m.g N
Sakowv30034966m.g Saccoglossus kowalevskii Sakowv30034966m.g N
Sakowv30034954m.g Saccoglossus kowalevskii Sakowv30034954m.g N
Sakowv30036995m.g Saccoglossus kowalevskii Sakowv30036995m.g N
Sakowv30036996m.g Saccoglossus kowalevskii Sakowv30036996m.g N
Sakowv30036997m.g Saccoglossus kowalevskii Sakowv30036997m.g N
Sakowv30036999m.g Saccoglossus kowalevskii Sakowv30036999m.g N
Sakowv30037000m.g Saccoglossus kowalevskii Sakowv30037000m.g N
Sakowv30037002m.g Saccoglossus kowalevskii Sakowv30037002m.g N
Sakowv30037003m.g Saccoglossus kowalevskii Sakowv30037003m.g N