ENSLOCG00000011297 (Lepisosteus oculatus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSLOCG00000011297 T244154_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.924 0.924
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.914 0.914
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.895 0.895
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.895 0.895
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.895 0.895
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.895 0.895
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.895 0.895
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.895 0.895
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.771 0.771
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000013885 IRF 9 114

Links

Other IRF family TFs
Other Lepisosteus oculatus TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF584 Homo sapiens ENSG00000171574 D
ZNF584 Canis familiaris ENSCAFG00000002361 I
ZNF584 Equus caballus ENSECAG00000016355 I
ZNF584 Felis catus ENSFCAG00000031378 I
ZNF584 Macaca mulatta ENSMMUG00000008730 I
ENSMPUG00000008302 Mustela putorius furo ENSMPUG00000008302 I
ENSNLEG00000011144 Nomascus leucogenys ENSNLEG00000011144 I
ZNF584 Otolemur garnettii ENSOGAG00000028454 I
ENSPANG00000020839 Papio anubis ENSPANG00000020839 I
ENSPPYG00000010503 Pongo abelii ENSPPYG00000010503 I
ZNF584 Pan troglodytes ENSPTRG00000011592 I
ZNF584 Sus scrofa ENSSSCG00000004004 I
ZNF584 Vicugna pacos ENSVPAG00000015475 I
ENSMMUP00000011441 Macaca fascicularis ENSMMUP00000011441 I
ZNF584 Procavia capensis ENSPCAG00000018877 N