Irf5 (Rattus norvegicus)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSRNOG00000007437 T244365_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.990 0.990
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.971 0.971
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.971 0.971
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.971 0.971
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.971 0.971
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.971 0.971
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.971 0.971
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.971 0.971
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.952 0.952
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.724 0.724
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.724 0.724
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.724 0.724
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.705 0.705
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000010001 IRF 16 121
ENSRNOP00000069195 IRF 16 121

Links

Other IRF family TFs
Other Rattus norvegicus TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSSTOG00000023146 Ictidomys tridecemlineatus ENSSTOG00000023146 N
NPAS4 Oryctolagus cuniculus ENSOCUG00000000905 N
ENSONIG00000005476 Oreochromis niloticus ENSONIG00000005476 N
NPAS4 Ochotona princeps ENSOPRG00000008977 N
npas4a Oryzias latipes ENSORLG00000001999 N
ENSPANG00000007006 Papio anubis ENSPANG00000007006 N
ENSPFOG00000009551 Poecilia formosa ENSPFOG00000009551 N
ENSPPYG00000003026 Pongo abelii ENSPPYG00000003026 N
NPAS4 Pan troglodytes ENSPTRG00000003923 N
NPAS4 Pteropus vampyrus ENSPVAG00000001233 N
Npas4 Rattus norvegicus ENSRNOG00000020009 N
NPAS4 Sorex araneus ENSSARG00000003603 N
ENSSHAG00000009488 Sarcophilus harrisii ENSSHAG00000009488 N
NPAS4 Sus scrofa ENSSSCG00000012942 N
ENSOARG00000005005 Ovis aries ENSOARG00000005005 N
npas4a Tetraodon nigroviridis ENSTNIG00000016823 N
npas4a Takifugu rubripes ENSTRUG00000011857 N
ENSTSYG00000001991 Tarsius syrichta ENSTSYG00000001991 N
NPAS4 Tursiops truncatus ENSTTRG00000001951 N
ENSXMAG00000013170 Xiphophorus maculatus ENSXMAG00000013170 N
Alligator_sinensis_CCG003708.1 Alligator sinensis Alligator_sinensis_CCG003708.1 N
Cmyd_10013223 Chelonia mydas Cmyd_10013223 N
ENSBTAP00000019870-D1 Bos grunniens ENSBTAP00000019870-D1 N
ENSP00000311196 Macaca fascicularis ENSP00000311196 N
Myotis_brandtii_NPAS4_10030769 Myotis brandtii Myotis_brandtii_NPAS4_10030769 N
Ogr08183 Ophisaurus gracilis Ogr08183 N
Pvit_07066 Pogona vitticeps Pvit_07066 N
npas4 Xenopus tropicalis XB-GENE-993002 N
NPAS4 Homo sapiens ENSG00000174576 N
ENSAMXG00000008132 Astyanax mexicanus ENSAMXG00000008132 N
NPAS4 Bos taurus ENSBTAG00000014925 N
NPAS4 Canis familiaris ENSCAFG00000012711 N
NPAS4 Callithrix jacchus ENSCJAG00000001482 N
NPAS4 Cavia porcellus ENSCPOG00000000685 N
ENSCSAG00000008212 Chlorocebus sabaeus ENSCSAG00000008212 N
npas4a Danio rerio ENSDARG00000055752 N
npas4b Danio rerio ENSDARG00000087753 N
NPAS4 Dasypus novemcinctus ENSDNOG00000042408 N
NPAS4 Equus caballus ENSECAG00000013683 N
NPAS4 Erinaceus europaeus ENSEEUG00000004685 N
NPAS4 Echinops telfairi ENSETEG00000003654 N
NPAS4 Felis catus ENSFCAG00000009299 N
ENSAMEG00000017065 Ailuropoda melanoleuca ENSAMEG00000017065 N
npas4a Gasterosteus aculeatus ENSGACG00000017076 N
NPAS4 Gorilla gorilla ENSGGOG00000008608 N
ENSGMOG00000003455 Gadus morhua ENSGMOG00000003455 N
NPAS4 Loxodonta africana ENSLAFG00000011138 N
ENSLOCG00000000650 Lepisosteus oculatus ENSLOCG00000000650 N
ENSMEUG00000004384 Macropus eugenii ENSMEUG00000004384 N
NPAS4 Microcebus murinus ENSMICG00000003754 N
NPAS4 Myotis lucifugus ENSMLUG00000004042 N
NPAS4 Macaca mulatta ENSMMUG00000015982 N
NPAS4 Monodelphis domestica ENSMODG00000008299 N
ENSMPUG00000003040 Mustela putorius furo ENSMPUG00000003040 N
Npas4 Mus musculus ENSMUSG00000045903 N
ENSNLEG00000006104 Nomascus leucogenys ENSNLEG00000006104 N