IRF6 (Taeniopygia guttata)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSTGUG00000001485 T244410_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.990 0.990
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.981 0.981
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.962 0.962
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.933 0.933
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.933 0.933
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.933 0.933
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.933 0.933
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.933 0.933
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.781 0.781
Irf5
M00177_2.00 		Mus musculus
NNNHGADASH
DSTHTCDNNN		 PBM
Badis et al.(2009)
Irf5_3874 		0.724 0.724
IRF5
M03332_2.00 		Homo sapiens
YCGAAACCGAAMCY
RGKTTCGGTTTCGR		 SELEX
Jolma et al.(2013)
IRF5_1 		0.724 0.724
IRF5
M03333_2.00 		Homo sapiens
HACCGAAACYV
BRGTTTCGGTD		 SELEX
Jolma et al.(2013)
IRF5_2 		0.724 0.724
IRF5
M05535_2.00 		Homo sapiens
NCGAAACCGAWACH
DGTWTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_eDBD_HT-SELEX 		0.724 0.724
IRF5
M05537_2.00 		Homo sapiens
NCGAAACCGAAACY
RGTTTCGGTTTCGN		 SELEX
Yin et al.(2017)
IRF5_FL_HT-SELEX 		0.724 0.724
IRF5
M10884_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$IRF5_Q3 		0.724 0.724
IRF5
M05536_2.00 		Homo sapiens
NYGAWACYGAWACH
DGTWTCRGTWTCRN		 SELEX
Yin et al.(2017)
IRF5_eDBD_Methyl-HT-SELEX 		0.724 0.724
IRF5
M05538_2.00 		Homo sapiens
NYGAAACCGAWACY
RGTWTCGGTTTCRN		 SELEX
Yin et al.(2017)
IRF5_FL_Methyl-HT-SELEX 		0.724 0.724
IRF5
M02256_2.00 		Oryctolagus cuniculus
NHCGAAACYN
NRGTTTCGDN		 PBM
Weirauch et al.(2014)
pTH9272 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000001534 IRF 9 114

Links

Other IRF family TFs
Other Taeniopygia guttata TFs

121 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI08G24230 Oryza rufipogon ORUFI08G24230 N
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N
Sb03g031000 Sorghum bicolor Sb03g031000 N
Sb02g029460 Sorghum bicolor Sb02g029460 N
OS12G0610600 Oryza sativa OS12G0610600 N
OS09G0509100 Oryza sativa OS09G0509100 N
OS08G0535800 Oryza sativa OS08G0535800 N
ORUFI12G20640 Oryza rufipogon ORUFI12G20640 N
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N
Si014408m.g Setaria italica Si014408m.g N
ORUFI07G15560 Oryza rufipogon ORUFI07G15560 N
ORGLA12G0157500 Oryza glaberrima ORGLA12G0157500 N
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N
ORGLA08G0227400 Oryza glaberrima ORGLA08G0227400 N
ORGLA07G0123600 Oryza glaberrima ORGLA07G0123600 N
OPUNC12G16690 Oryza punctata OPUNC12G16690 N
OPUNC09G14320 Oryza punctata OPUNC09G14320 N
OPUNC08G19870 Oryza punctata OPUNC08G19870 N
mgf006124m Mimulus guttatus mgf006124m N
Pavir.J23083 Panicum virgatum Pavir.J23083 N
Pavir.J11699 Panicum virgatum Pavir.J11699 N
Pavir.J04931 Panicum virgatum Pavir.J04931 N
Lus10034999.g Linum usitatissimum Lus10034999.g N
Lus10012927.g Linum usitatissimum Lus10012927.g N
Eucgr.K02205 Eucalyptus grandis Eucgr.K02205 N
Aquca_003_00875 Aquilegia coerulea Aquca_003_00875 N
mgf019352m Mimulus guttatus mgf019352m N
ONIVA12G17390 Oryza nivara ONIVA12G17390 N
Cucsa.087480 Cucumis sativus Cucsa.087480 N
Cla000384 Citrullus lanatus Cla000384 N
Ca_22941 Cicer arietinum Ca_22941 N
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N
Traes_5BS_9F043AE17 Triticum aestivum Traes_5BS_9F043AE17 N
Traes_5AS_E5FD82E36 Triticum aestivum Traes_5AS_E5FD82E36 N
Solyc07g066330.2 Solanum lycopersicum Solyc07g066330.2 N
Si030942m.g Setaria italica Si030942m.g N
GRMZM2G054277 Zea mays GRMZM2G054277 N
MLOC_64240 Hordeum vulgare MLOC_64240 N
MLOC_55957 Hordeum vulgare MLOC_55957 N
LPERR12G15510 Leersia perrieri LPERR12G15510 N
LPERR09G12100 Leersia perrieri LPERR09G12100 N
LPERR08G18520 Leersia perrieri LPERR08G18520 N
GRMZM2G179049 Zea mays GRMZM2G179049 N
GRMZM2G114850 Zea mays GRMZM2G114850 N
GRMZM2G100583 Zea mays GRMZM2G100583 N
OB09G22520 Oryza brachyantha OB09G22520 N
GRMZM2G054252 Zea mays GRMZM2G054252 N
F775_31820 Aegilops tauschii F775_31820 N
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N
BRADI4G02060 Brachypodium distachyon BRADI4G02060 N
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N
BGIOSGA037778 Oryza indica BGIOSGA037778 N
BGIOSGA031062 Oryza indica BGIOSGA031062 N
BGIOSGA029063 Oryza indica BGIOSGA029063 N
OLONG_020119 Oryza longistaminata OLONG_020119 N
ONIVA09G17010 Oryza nivara ONIVA09G17010 N
ONIVA08G24840 Oryza nivara ONIVA08G24840 N
ONIVA07G13650 Oryza nivara ONIVA07G13650 N
ONIVA07G09980 Oryza nivara ONIVA07G09980 N
OMERI12G13180 Oryza meridionalis OMERI12G13180 N
OMERI09G11810 Oryza meridionalis OMERI09G11810 N
OMERI07G11790 Oryza meridionalis OMERI07G11790 N
OMERI06G13840 Oryza meridionalis OMERI06G13840 N
BGIOSGA025747 Oryza indica BGIOSGA025747 N
OGLUM12G20140 Oryza glumaepatula OGLUM12G20140 N
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N
OGLUM08G23090 Oryza glumaepatula OGLUM08G23090 N
OGLUM07G14740 Oryza glumaepatula OGLUM07G14740 N
OBART12G18490 Oryza barthii OBART12G18490 N
OBART09G15890 Oryza barthii OBART09G15890 N
OBART08G21800 Oryza barthii OBART08G21800 N
OB12G25170 Oryza brachyantha OB12G25170 N