gene30750-v1.0-hybrid (Fragaria vesca)
Leafy

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01698 (FLO_LFY) IPR002910 gene30750-v1.0-hybrid T244788_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LFY
M02692_2.00 		Arabidopsis thaliana
YWTKRACCRSYGGTYMAWR
YWTKRACCRSYGGTYMAWR		 SELEX
Mathelier et al.(2014)
MA0590.1 		0.738 0.738
LFY
M10895_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$LFY_Q2 		0.738 0.738
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna30750.1-v1.0-hybrid Leafy 1 364

Links

Other Leafy family TFs
Other Fragaria vesca TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THITE_2111320 Thielavia terrestris THITE_2111320 I
MYCTH_2310995 Myceliophthora thermophila MYCTH_2310995 I
FVEG_13087 Fusarium verticillioides FVEG_13087 I
GLRG_02684 Colletotrichum graminicola GLRG_02684 N
VDAG_04931 Verticillium dahliae VDAG_04931 N
UV8b_1075 Ustilaginoidea virens UV8b_1075 N
UCRPA7_8745 Togninia minima UCRPA7_8745 N
TRIVIDRAFT_83840 Trichoderma virens TRIVIDRAFT_83840 N
TRIATDRAFT_137322 Trichoderma atroviride TRIATDRAFT_137322 N
S40288_07939 Stachybotrys chartarum S40288_07939 N
PODANS_1_21980 Podospora anserina PODANS_1_21980 N
OCS_01296 Ophiocordyceps sinensis OCS_01296 N
MAM_01245 Metarhizium album MAM_01245 N
MAC_05830 Metarhizium acridum MAC_05830 N
BBA_06440 Beauveria bassiana BBA_06440 N
FOXG_15625 Fusarium oxysporum FOXG_15625 N
FFUJ_05599 Fusarium fujikuroi FFUJ_05599 N
F503_03380 Ophiostoma piceae uamh F503_03380 N
CTHT_0011050 Chaetomium thermophilum CTHT_0011050 N
CSUB01_07163 Colletotrichum sublineola CSUB01_07163 N
CPUR_00646 Claviceps purpurea CPUR_00646 N
Cob_03702 Colletotrichum orbiculare Cob_03702 N
CHGG_06691 Chaetomium globosum CHGG_06691 N
CH063_08407 Colletotrichum higginsianum CH063_08407 N
CGGC5_13696 Colletotrichum gloeosporioides CGGC5_13696 N
CFIO01_12163 Colletotrichum fioriniae CFIO01_12163 N