CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OBART03G03820
(
Oryza barthii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
OBART03G03820
T245536_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
LBD16
M00870_2.00
Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH
PBM
Franco-Zorrilla et al.(2014)
LBD16
0.722
0.722
LBD16
M06958_2.00
Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS
Dap-seq
OMalley et al.(2016)
ASL18_col_a
0.722
0.722
LBD16
M06959_2.00
Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS
Dap-seq
OMalley et al.(2016)
ASL18_colamp_a
0.722
0.722
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART03G03820.1
LOB
13
103
PCGACKFLRRKCAAECVFAPYFCAEDGAAQFAAIHKVFGASNAAKLLQQVAPGDRSEVAATVTYEAQARLRDPVYGCVAHIFALQQQVITN
Links
Other
LOB
family TFs
Other
Oryza barthii
TFs
76 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cfi-1
Caenorhabditis elegans
WBGene00000476
D
NCU01238
Neurospora crassa
NCU01238
D
CIMG_06555
Coccidioides immitis
CIMG_06555
I
CLUG_00471
Candida lusitaniae
CLUG_00471
I
CPAG_04992
Candida parapsilosis
CPAG_04992
I
MCYG_01846
Microsporum canis
MCYG_01846
I
SNOG_11200
Stagonospora nodorum
SNOG_11200
I
VDBG_07586
Verticillium albo atrum
VDBG_07586
I
A1O1_02396
Capronia coronata
A1O1_02396
I
A1O3_00648
Capronia epimyces
A1O3_00648
I
A1O5_01000
Cladophialophora psammophila
A1O5_01000
I
A1O7_04628
Cladophialophora yegresii
A1O7_04628
I
A1O9_09248
Exophiala aquamarina
A1O9_09248
I
ACRE_026770
Acremonium chrysogenum
ACRE_026770
I
AOL_s00007g450
Arthrobotrys oligospora
AOL_s00007g450
I
ARB_06850
Arthroderma benhamiae
ARB_06850
I
AUEXF2481DRAFT_73501
Aureobasidium subglaciale
AUEXF2481DRAFT_73501
I
BBA_06597
Beauveria bassiana
BBA_06597
I
Bcin02g00190
Botrytis cinerea
Bcin02g00190
I
BDDG_05039
Blastomyces dermatitidis
BDDG_05039
I
BGHDH14_bgh06435
Blumeria graminis
BGHDH14_bgh06435
I
BN7_4555
Wickerhamomyces ciferrii
BN7_4555
I
ACLA_001740
Aspergillus clavatus
CADACLAG00000030
I
CADAFLAG00010689
Aspergillus flavus
CADAFLAG00010689
I
AFUA_5G03430
Aspergillus fumigatus
CADAFUAG00002555
I
CADANGAG00008115
Aspergillus niger
CADANGAG00008115
I
ANIA_08211
Aspergillus nidulans
CADANIAG00004258
I
CADAORAG00009843
Aspergillus oryzae
CADAORAG00009843
I
ATEG_08071
Aspergillus terreus
CADATEAG00004027
I
NFIA_038680
Neosartorya fischeri
CADNFIAG00003100
I
CaO19.2476
Candida albicans
CaO19.2476
I
CBG03778
Caenorhabditis briggsae
CBG03778
I
CBN20917
Caenorhabditis brenneri
CBN20917
I
CBN31184
Caenorhabditis brenneri
CBN31184
I
CCM_07966
Cordyceps militaris
CCM_07966
I
CD36_05420
Candida dubliniensis
CD36_05420
I
CFIO01_06489
Colletotrichum fioriniae
CFIO01_06489
I
CGGC5_4303
Colletotrichum gloeosporioides
CGGC5_4303
I
CH063_04817
Colletotrichum higginsianum
CH063_04817
I
CHGG_07655
Chaetomium globosum
CHGG_07655
I
CJA19335
Caenorhabditis japonica
CJA19335
I
CLUG_00471
Clavispora lusitaniae
CLUG_00471
I
CMQ_2334
Grosmannia clavigera
CMQ_2334
I
Cob_08727
Colletotrichum orbiculare
Cob_08727
I
COCC4DRAFT_162164
Bipolaris maydis
COCC4DRAFT_162164
I
COCCADRAFT_5842
Bipolaris zeicola
COCCADRAFT_5842
I
COCMIDRAFT_5916
Bipolaris oryzae
COCMIDRAFT_5916
I
COCSADRAFT_82804
Bipolaris sorokiniana
COCSADRAFT_82804
I
COCVIDRAFT_24723
Bipolaris victoriae
COCVIDRAFT_24723
I
CORT_0B08690
Candida orthopsilosis
CORT_0B08690
I
CPC735_030240
Coccidioides posadasii
CPC735_030240
I
CPUR_02782
Claviceps purpurea
CPUR_02782
I
CRE08062
Caenorhabditis remanei
CRE08062
I
CSUB01_10732
Colletotrichum sublineola
CSUB01_10732
I
CTHT_0027590
Chaetomium thermophilum
CTHT_0027590
I
CTRG_04819
Candida tropicalis
CTRG_04819
I
DEHA2D02310g
Debaryomyces hansenii
DEHA2D02310g
I
EPUS_07035
Endocarpon pusillum
EPUS_07035
I
EURHEDRAFT_374583
Aspergillus ruber
EURHEDRAFT_374583
I
EV44_g6012
Erysiphe necator
EV44_g6012
I
F503_04087
Ophiostoma piceae uamh
F503_04087
I
FFUJ_13017
Fusarium fujikuroi
FFUJ_13017
I
FGRRES_16557
Fusarium graminearum
FGRRES_16557
I
FPSE_05803
Fusarium pseudograminearum
FPSE_05803
I
G210_1683
Candida maltosa
G210_1683
I
G647_04054
Cladophialophora carrionii
G647_04054
I
GGTG_06066
Gaeumannomyces graminis
GGTG_06066
I
GLRG_10729
Colletotrichum graminicola
GLRG_10729
I
GMDG_07609
Pseudogymnoascus destructans
GMDG_07609
I
GNLVRS01_PISO0I02516g
Millerozyma farinosa
GNLVRS01_PISO0I02516g
I
GNLVRS01_PISO0J04299g
Millerozyma farinosa
GNLVRS01_PISO0J04299g
I
GSTUM_00011726001
Tuber melanosporum
GSTUM_00011726001
I
H072_8579
Dactylellina haptotyla
H072_8579
I
H101_00678
Trichophyton interdigitale
H101_00678
I
HCBG_06506
Histoplasma capsulatum
HCBG_06506
I
HMPREF1120_02353
Exophiala dermatitidis
HMPREF1120_02353
I
HMPREF1541_08981
Cyphellophora europaea
HMPREF1541_08981
I
HMPREF1624_03854
Sporothrix schenckii
HMPREF1624_03854
I
KLTH0H03410g
Lachancea thermotolerans
KLTH0H03410g
I
KUCA_T00003760001
Kuraishia capsulata
KUCA_T00003760001
I
LALA0_S05e06744g
Lachancea lanzarotensis
LALA0_S05e06744g
I
LEMA_P003470.1
Leptosphaeria maculans
LEMA_P003470.1
I
M437DRAFT_88829
Aureobasidium melanogenum
M437DRAFT_88829
I
M438DRAFT_363827
Aureobasidium pullulans
M438DRAFT_363827
I
MAC_04053
Metarhizium acridum
MAC_04053
I
MAJ_08493
Metarhizium majus
MAJ_08493
I
MAM_07193
Metarhizium album
MAM_07193
I
MANI_025504
Metarhizium anisopliae
MANI_025504
I
MAPG_04048
Magnaporthe poae
MAPG_04048
I
MBM_08533
Marssonina brunnea
MBM_08533
I
MBR_07220
Metarhizium brunneum
MBR_07220
I
MCYG_01846
Arthroderma otae
MCYG_01846
I
MGG_04878
Magnaporthe oryzae
MGG_04878
I
MGU_06069
Metarhizium guizhouense
MGU_06069
I
MGYG_04221
Microsporum gypseum
MGYG_04221
I
MPH_03949
Macrophomina phaseolina
MPH_03949
I
MYCTH_2301553
Myceliophthora thermophila
MYCTH_2301553
I
NCAS_0D03980
Naumovozyma castellii
NCAS_0D03980
I
NEUTE1DRAFT_127630
Neurospora tetrasperma
NEUTE1DRAFT_127630
I
OIDMADRAFT_165409
Oidiodendron maius
OIDMADRAFT_165409
I
PAAG_04304
Paracoccidioides sp lutzii
PAAG_04304
I
PABG_04080
Paracoccidioides brasiliensis
PABG_04080
I
PAS_chr2-1_0025
Komagataella pastoris
PAS_chr2-1_0025
I
PCH_Pc21g15950
Penicillium rubens
PCH_Pc21g15950
I
PDE_09498
Penicillium oxalicum
PDE_09498
I
PDIP_48900
Penicillium digitatum
PDIP_48900
I
PEX1_017870
Penicillium expansum
PEX1_017870
I
PFICI_11606
Pestalotiopsis fici
PFICI_11606
I
PICST_85882
Scheffersomyces stipitis
PICST_85882
I
PITC_013420
Penicillium italicum
PITC_013420
I
PMAA_082150
Talaromyces marneffei
PMAA_082150
I
PODANS_2_6940
Podospora anserina
PODANS_2_6940
I
Ppa-cfi-1
Pristionchus pacificus
PPA22897
I
PTRG_11043
Pyrenophora triticirepentis
PTRG_11043
I
PTT_07707
Pyrenophora teres
PTT_07707
I
PV04_04630
Capronia semiimmersa
PV04_04630
I
PV05_02348
Exophiala xenobiotica
PV05_02348
I
PV06_01624
Exophiala oligosperma
PV06_01624
I
PV07_05545
Cladophialophora immunda
PV07_05545
I
PV08_02493
Exophiala spinifera
PV08_02493
I
PV09_01976
Verruconis gallopava
PV09_01976
I
PV10_06581
Exophiala mesophila
PV10_06581
I
PV11_02063
Exophiala sideris
PV11_02063
I
PVAR5_5506
Byssochlamys spectabilis
PVAR5_5506
I
S40285_02726
Stachybotrys chlorohalonata
S40285_02726
I
S40288_09644
Stachybotrys chartarum
S40288_09644
I
SAPIO_CDS8283
Scedosporium apiospermum
SAPIO_CDS8283
I
SBOR_1449
Sclerotinia borealis
SBOR_1449
I
SETTUDRAFT_92929
Setosphaeria turcica
SETTUDRAFT_92929
I
SMAC_03938
Sordaria macrospora
SMAC_03938
I
SNOG_11200
Phaeosphaeria nodorum
SNOG_11200
I
SPAPADRAFT_131982
Spathaspora passalidarum
SPAPADRAFT_131982
I
SPBR_01187
Sporothrix brasiliensis
SPBR_01187
I
SS1G_01477
Sclerotinia sclerotiorum
SS1G_01477
I
TEQG_03551
Trichophyton equinum
TEQG_03551
I
TESG_00566
Trichophyton tonsurans
TESG_00566
I
THITE_2107776
Thielavia terrestris
THITE_2107776
I
TRIATDRAFT_229470
Trichoderma atroviride
TRIATDRAFT_229470
I
TRV_05239
Trichophyton verrucosum
TRV_05239
I
TSTA_116820
Talaromyces stipitatus
TSTA_116820
I
U727_00430460301
Penicillium solitum
U727_00430460301
I
UCRNP2_8300
Neofusicoccum parvum
UCRNP2_8300
I
UCRPA7_3563
Togninia minima
UCRPA7_3563
I
UREG_03885
Uncinocarpus reesii
UREG_03885
I
UV8b_135
Ustilaginoidea virens
UV8b_135
I
VDAG_09307
Verticillium dahliae
VDAG_09307
I
VDBG_07586
Verticillium alfalfae
VDBG_07586
I
VHEMI05600
Torrubiella hemipterigena
VHEMI05600
I
W97_02158
Coniosporium apollinis
W97_02158
I
X797_006583
Metarhizium robertsii
X797_006583
I
YALI0_C16390g
Yarrowia lipolytica
YALI0_C16390g
I
Z517_06623
Fonsecaea pedrosoi
Z517_06623
I
Z518_00744
Rhinocladiella mackenziei
Z518_00744
I
Z519_00926
Cladophialophora bantiana
Z519_00926
I
ZBAI_04622
Zygosaccharomyces bailii
ZBAI_04622
I
ZBAI_06663
Zygosaccharomyces bailii
ZBAI_06663
I
ZYRO0E07546g
Zygosaccharomyces rouxii
ZYRO0E07546g
I
estExt_fgenesh2_pg.C_10495
Neurospora discreta
estExt_fgenesh2_pg.C_10495
I
estExt_Genewise1Plus.C_70765
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_70765
I
estExt_gwp_genewisePlus_human.C_chr_1.10215
Pichia stipitis
estExt_gwp_genewisePlus_human.C_chr_1.10215
I
Scas_Contig720.39
Saccharomyces castellii
Scas_Contig720.39
I
17061_Multiple
Saccharomyces mikatae
17061_Multiple
I
AB01205.1
Alternaria brassicicola
AB01205.1
I
estExt_fgenesh1_pg.C_11736
Cryphonectria parasitica
estExt_fgenesh1_pg.C_11736
I
fgenesh1_pg.00153_#_202
Aspergillus carbonarius
fgenesh1_pg.00153_#_202
I
KLTH0H03410g
Kluyveromyces thermotolerans
KLTH0H03410g
I
Kwal_24206
Kluyveromyces waltii
Kwal_24206
I
Pc21g15950
Penicillium chrysogenum
Pc21g15950
I
PMAA_082150
Penicillium marneffei
PMAA_082150
I
XP_002490905.1
Pichia pastoris
XP_002490905.1
I
DICVIV_09524
Dictyocaulus viviparus
DICVIV_09524
I
HCOI01699600
Haemonchus contortus
HCOI01699600
I
HPBE_0001175401
Heligmosomoides bakeri
HPBE_0001175401
I
HPLM_0000026501
Haemonchus placei
HPLM_0000026501
I
L596_g18623
Steinernema carpocapsae
L596_g18623
I
L892_g2594
Steinernema scapterisci
L892_g2594
I
L893_g30313
Steinernema glaseri
L893_g30313
I
L898_g8620
Steinernema monticolum
L898_g8620
I
nDi.2.2.2.g06314
Dirofilaria immitis
nDi.2.2.2.g06314
I
nLs.2.1.2.g03385
Litomosoides sigmodontis
nLs.2.1.2.g03385
I
PTRK_0001398600
Parastrongyloides trichosuri
PTRK_0001398600
I
RSKR_0000557500
Rhabditophanes kr3021
RSKR_0000557500
I
scaffold133-EXSNAP2012.15
Pristionchus exspectatus
scaffold133-EXSNAP2012.15
I
SPAL_0001687600
Strongyloides papillosus
SPAL_0001687600
I
SSTP_0000553900
Strongyloides stercoralis
SSTP_0000553900
I
SVE_0862400
Strongyloides venezuelensis
SVE_0862400
I
BGIBMGA004558
Bombyx mori
BGIBMGA004558
N
ENSAMXG00000013606
Astyanax mexicanus
ENSAMXG00000013606
N
ENSCHOG00000011802
Choloepus hoffmanni
ENSCHOG00000011802
N
arid1ab
Danio rerio
ENSDARG00000101891
N
ENSGACG00000006735
Gasterosteus aculeatus
ENSGACG00000006735
N
arid1ab
Gasterosteus aculeatus
ENSGACG00000007627
N
ENSGMOG00000001024
Gadus morhua
ENSGMOG00000001024
N
ENSLOCG00000003798
Lepisosteus oculatus
ENSLOCG00000003798
N
ENSOANG00000030531
Ornithorhynchus anatinus
ENSOANG00000030531
N
ENSONIG00000007618
Oreochromis niloticus
ENSONIG00000007618
N
ENSONIG00000008068
Oreochromis niloticus
ENSONIG00000008068
N
ENSPFOG00000002208
Poecilia formosa
ENSPFOG00000002208
N
ENSPFOG00000007276
Poecilia formosa
ENSPFOG00000007276
N
ENSPFOG00000015517
Poecilia formosa
ENSPFOG00000015517
N
ENSPVAG00000010595
Pteropus vampyrus
ENSPVAG00000010595
N
ENSSHAG00000000588
Sarcophilus harrisii
ENSSHAG00000000588
N
ENSSSCG00000028486
Sus scrofa
ENSSSCG00000028486
N
arid1aa
Tetraodon nigroviridis
ENSTNIG00000009659
N
arid1ab
Takifugu rubripes
ENSTRUG00000012325
N
ENSTSYG00000011521
Tarsius syrichta
ENSTSYG00000011521
N
ENSXMAG00000009940
Xiphophorus maculatus
ENSXMAG00000009940
N
ENSXMAG00000010716
Xiphophorus maculatus
ENSXMAG00000010716
N
HMEL015554
Heliconius melpomene
HMEL015554
N
KGM_20601
Danaus plexippus
KGM_20601
N
MCINX012993
Melitaea cinxia
MCINX012993
N
RPRC011053
Rhodnius prolixus
RPRC011053
N
V565_026470
Rhizoctonia solani
V565_026470
N
Gfo_R011571
Geospiza fortis
Gfo_R011571
N
CLEC007177
Cimex lectularius
CLEC007177
N
XP_002934686
Xenopus tropicalis
XP_002934686
N