Traes_1AL_4B89B33E3 (Triticum aestivum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Traes_1AL_4B89B33E3 T246149_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.879 0.879
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_1AL_4B89B33E3.1 LOB 36 134

Links

Other LOB family TFs
Other Triticum aestivum TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
kmt2a Xenopus tropicalis XB-GENE-922912 D
XP_002932945 Xenopus tropicalis XP_002932945 I
ENSGMOG00000011724 Gadus morhua ENSGMOG00000011724 I
ENSPFOG00000008123 Poecilia formosa ENSPFOG00000008123 I
KMT2B Callithrix jacchus ENSCJAG00000010126 I
XP_002932944 Xenopus tropicalis XP_002932944 I
ENSOARG00000004987 Ovis aries ENSOARG00000004987 N
ENSONIG00000002752 Oreochromis niloticus ENSONIG00000002752 N
ENSONIG00000019760 Oreochromis niloticus ENSONIG00000019760 N
KMT2B Ochotona princeps ENSOPRG00000001336 N
ENSORLG00000006471 Oryzias latipes ENSORLG00000006471 N
ENSPANG00000007179 Papio anubis ENSPANG00000007179 N
KMT2B Procavia capensis ENSPCAG00000004566 N
ENSPFOG00000006642 Poecilia formosa ENSPFOG00000006642 N
ENSPPYG00000009877 Pongo abelii ENSPPYG00000009877 N
KMT2B Pan troglodytes ENSPTRG00000010858 N
KMT2B Pteropus vampyrus ENSPVAG00000012828 N
Kmt2b Rattus norvegicus ENSRNOG00000055525 N
KMT2B Otolemur garnettii ENSOGAG00000004157 N
ENSSSCG00000002895 Sus scrofa ENSSSCG00000002895 N
ENSSTOG00000027453 Ictidomys tridecemlineatus ENSSTOG00000027453 N
KMT2B Tupaia belangeri ENSTBEG00000007263 N
ENSTNIG00000018468 Tetraodon nigroviridis ENSTNIG00000018468 N
ENSTRUG00000013996 Takifugu rubripes ENSTRUG00000013996 N
ENSTRUG00000015234 Takifugu rubripes ENSTRUG00000015234 N
KMT2B Tursiops truncatus ENSTTRG00000002243 N
ENSXMAG00000010541 Xiphophorus maculatus ENSXMAG00000010541 N
Alligator_sinensis_CCG001547.1 Alligator sinensis Alligator_sinensis_CCG001547.1 N
ENSP00000398837-D1 Bos grunniens ENSP00000398837-D1 N
ENSP00000398837 Macaca fascicularis ENSP00000398837 N
Myotis_brandtii_WBP7_10035154 Myotis brandtii Myotis_brandtii_WBP7_10035154 N
Ogr13647 Ophisaurus gracilis Ogr13647 N
Pvit_00563 Pogona vitticeps Pvit_00563 N
ENSGACG00000007639 Gasterosteus aculeatus ENSGACG00000007639 N
ENSAMEG00000000319 Ailuropoda melanoleuca ENSAMEG00000000319 N
ENSAMXG00000004670 Astyanax mexicanus ENSAMXG00000004670 N
KMT2B Bos taurus ENSBTAG00000002763 N
KMT2B Canis familiaris ENSCAFG00000006878 N
KMT2B Cavia porcellus ENSCPOG00000003718 N
ENSCSAG00000004387 Chlorocebus sabaeus ENSCSAG00000004387 N
kmt2bb Danio rerio ENSDARG00000060697 N
KMT2B Dasypus novemcinctus ENSDNOG00000005517 N
Kmt2b Dipodomys ordii ENSDORG00000009061 N
ENSECAG00000007605 Equus caballus ENSECAG00000007605 N
KMT2B Erinaceus europaeus ENSEEUG00000013250 N
KMT2B Felis catus ENSFCAG00000006381 N
KMT2B Homo sapiens ENSG00000272333 N
ENSGACG00000004248 Gasterosteus aculeatus ENSGACG00000004248 N
KMT2B Oryctolagus cuniculus ENSOCUG00000012768 N
KMT2B Gorilla gorilla ENSGGOG00000016796 N
ENSGMOG00000000095 Gadus morhua ENSGMOG00000000095 N
ENSGMOG00000017196 Gadus morhua ENSGMOG00000017196 N
KMT2B Loxodonta africana ENSLAFG00000018741 N
ENSLOCG00000004031 Lepisosteus oculatus ENSLOCG00000004031 N
ENSMEUG00000014580 Macropus eugenii ENSMEUG00000014580 N
KMT2B Microcebus murinus ENSMICG00000009928 N
KMT2B Myotis lucifugus ENSMLUG00000011406 N
KMT2B Macaca mulatta ENSMMUG00000002381 N
KMT2B Monodelphis domestica ENSMODG00000013994 N
ENSMPUG00000006206 Mustela putorius furo ENSMPUG00000006206 N
Kmt2b Mus musculus ENSMUSG00000006307 N
ENSNLEG00000011306 Nomascus leucogenys ENSNLEG00000011306 N
KMT2B Anolis carolinensis ENSACAG00000016679 N