Ca_19716 (Cicer arietinum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ca_19716 T246317_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.737 0.737
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.737 0.737
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.737 0.737
LBD18
M06962_2.00 		Arabidopsis thaliana
SCGGRRAWHVHGSMRNNDN
NHNNYKSCDBDWTYYCCGS		 Dap-seq
OMalley et al.(2016)
LBD18_col_a 		0.717 0.717
LBD18
M06963_2.00 		Arabidopsis thaliana
CDBDWTTTMHGSHRN
NYDSCDKAAAWHVHG		 Dap-seq
OMalley et al.(2016)
LBD18_colamp_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_19716 LOB 37 136

Links

Other LOB family TFs
Other Cicer arietinum TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
kn Drosophila melanogaster FBgn0001319 D 0.000
AARA002866 Anopheles arabiensis AARA002866 I 0.000
KGM_09934 Danaus plexippus KGM_09934 I 0.000
L798_15574 Zootermopsis nevadensis L798_15574 I 0.000
MCINX016127 Melitaea cinxia MCINX016127 I 0.000
MESCA011260 Megaselia scalaris MESCA011260 I 0.000
PHUM119360 Pediculus humanus PHUM119360 I 0.000
TC001270 Tribolium castaneum TC001270 I 0.000
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.000
LCUP013861 Lucilia cuprina LCUP013861 I 0.000
ISCW021819 Ixodes scapularis ISCW021819 I 0.000
ACHR005921 Anopheles christyi ACHR005921 I 0.000
ACUA000475 Anopheles culicifacies ACUA000475 I 0.000
AEPI003554 Anopheles epiroticus AEPI003554 I 0.000
AFUN004907 Anopheles funestus AFUN004907 I 0.000
AMEC010301 Anopheles melas AMEC010301 I 0.000
ASTEI11507 Anopheles stephensi ASTEI11507 I 0.000
MDOA011385 Musca domestica MDOA011385 I 0.000
GI21022 Drosophila mojavensis FBgn0143754 I 0.000
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.000
ACYPI50903 Acyrthosiphon pisum ACYPI50903 I 0.000
CGI_10023990 Crassostrea gigas CGI_10023990 I 0.000
CPIJ010141 Culex quinquefasciatus CPIJ010141 I 0.000
GF11778 Drosophila ananassae FBgn0088818 I 0.000
GG22397 Drosophila erecta FBgn0114569 I 0.000
GH20479 Drosophila grimshawi FBgn0127942 I 0.000
GH25280 Drosophila grimshawi FBgn0132735 I 0.000
CpipJ_CPIJ010141 Culex pipiens CpipJ_CPIJ010141 I 0.000
GL10656 Drosophila persimilis FBgn0148266 I 0.000
GM20182 Drosophila sechellia FBgn0175065 I 0.000
GJ21945 Drosophila virilis FBgn0209060 I 0.000
GK23295 Drosophila willistoni FBgn0225257 I 0.000
GE12286 Drosophila yakuba FBgn0230042 I 0.000
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.000
GB42304 Apis mellifera GB42304 I 0.000
Ocbimv22038947m.g Octopus bimaculoides Ocbimv22038947m.g N 0.000
ASIS008882 Anopheles sinensis ASIS008882 N 0.000