Pm010483 (Prunus mume)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pm010483 T246368_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm010483 LOB 8 106

Links

Other LOB family TFs
Other Prunus mume TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
KUA1 Arabidopsis thaliana AT5G47390 D
AT5G61620 Arabidopsis thaliana AT5G61620 D
fgenesh1_pg.scaffold_70000111 Physcomitrella patens fgenesh1_pg.scaffold_70000111 D
AMTR_s00074p00097250 Amborella trichopoda AMTR_s00074p00097250 I
AMTR_s00111p00135880 Amborella trichopoda AMTR_s00111p00135880 I
AT1G70000 Arabidopsis thaliana AT1G70000 I
BGIOSGA002215 Oryza indica BGIOSGA002215 I
BGIOSGA002232 Oryza indica BGIOSGA002232 I
BGIOSGA017461 Oryza indica BGIOSGA017461 I
BGIOSGA027987 Oryza indica BGIOSGA027987 I
Bo1g051550 Brassica oleracea Bo1g051550 I
Bo2g066810 Brassica oleracea Bo2g066810 I
Bo2g132340 Brassica oleracea Bo2g132340 I
Bo2g161470 Brassica oleracea Bo2g161470 I
Bo6g094990 Brassica oleracea Bo6g094990 I
Bo7g098880 Brassica oleracea Bo7g098880 I
Bo7g105100 Brassica oleracea Bo7g105100 I
Bo9g127350 Brassica oleracea Bo9g127350 I
Bra003969 Brassica rapa Bra003969 I
Bra007892 Brassica rapa Bra007892 I
Bra012665 Brassica rapa Bra012665 I
Bra012936 Brassica rapa Bra012936 I
Bra022127 Brassica rapa Bra022127 I
Bra026253 Brassica rapa Bra026253 I
Bra029320 Brassica rapa Bra029320 I
BRADI2G05590 Brachypodium distachyon BRADI2G05590 I
BRADI2G05760 Brachypodium distachyon BRADI2G05760 I
BRADI3G17170 Brachypodium distachyon BRADI3G17170 I
BRADI3G33400 Brachypodium distachyon BRADI3G33400 I
F775_07352 Aegilops tauschii F775_07352 I
F775_11223 Aegilops tauschii F775_11223 I
F775_13323 Aegilops tauschii F775_13323 I
fgenesh2_kg.2__1257__AT1G70000.1 Arabidopsis lyrata fgenesh2_kg.2__1257__AT1G70000.1 I
fgenesh2_kg.8__2146__AT5G61620.1 Arabidopsis lyrata fgenesh2_kg.8__2146__AT5G61620.1 I
GLYMA01G00600 Glycine max GLYMA01G00600 I
GLYMA01G04530 Glycine max GLYMA01G04530 I
GLYMA02G03020 Glycine max GLYMA02G03020 I
GLYMA05G36290 Glycine max GLYMA05G36290 I
GLYMA08G03330 Glycine max GLYMA08G03330 I
GLYMA08G40460 Glycine max GLYMA08G40460 I
GLYMA14G10740 Glycine max GLYMA14G10740 I
GRMZM2G034110 Zea mays GRMZM2G034110 I
GRMZM2G049695 Zea mays GRMZM2G049695 I
GRMZM2G108892 Zea mays GRMZM2G108892 I
GRMZM2G157306 Zea mays GRMZM2G157306 I
GRMZM2G400489 Zea mays GRMZM2G400489 I
GRMZM5G813892 Zea mays GRMZM5G813892 I
GSMUA_Achr11G00670_001 Musa acuminata GSMUA_Achr11G00670_001 I
GSMUA_Achr5G09240_001 Musa acuminata GSMUA_Achr5G09240_001 I
GSMUA_Achr7G06880_001 Musa acuminata GSMUA_Achr7G06880_001 I
LPERR01G05380 Leersia perrieri LPERR01G05380 I
LPERR01G05630 Leersia perrieri LPERR01G05630 I
LPERR05G05230 Leersia perrieri LPERR05G05230 I
LPERR05G23440 Leersia perrieri LPERR05G23440 I
LPERR08G03010 Leersia perrieri LPERR08G03010 I
LPERR10G14380 Leersia perrieri LPERR10G14380 I
MLOC_10528 Hordeum vulgare MLOC_10528 I
MLOC_70777 Hordeum vulgare MLOC_70777 I
MLOC_73122 Hordeum vulgare MLOC_73122 I
MLOC_76271 Hordeum vulgare MLOC_76271 I
MTR_6g092540 Medicago truncatula MTR_6g092540 I
MTR_8g101650 Medicago truncatula MTR_8g101650 I
OB01G15870 Oryza brachyantha OB01G15870 I
OB05G15660 Oryza brachyantha OB05G15660 I
OB05G35300 Oryza brachyantha OB05G35300 I
OB08G13080 Oryza brachyantha OB08G13080 I
OB10G25650 Oryza brachyantha OB10G25650 I
OBART01G05710 Oryza barthii OBART01G05710 I
OBART01G05900 Oryza barthii OBART01G05900 I
OBART05G06190 Oryza barthii OBART05G06190 I
OBART05G27750 Oryza barthii OBART05G27750 I
OBART08G03010 Oryza barthii OBART08G03010 I
OBART10G18550 Oryza barthii OBART10G18550 I
OGLUM01G06250 Oryza glumaepatula OGLUM01G06250 I
OGLUM01G06460 Oryza glumaepatula OGLUM01G06460 I
OGLUM05G06460 Oryza glumaepatula OGLUM05G06460 I
OGLUM05G29240 Oryza glumaepatula OGLUM05G29240 I
OGLUM08G03020 Oryza glumaepatula OGLUM08G03020 I
OGLUM10G18630 Oryza glumaepatula OGLUM10G18630 I
OLONG_008716 Oryza longistaminata OLONG_008716 I
OLONG_012642 Oryza longistaminata OLONG_012642 I
OLONG_013887 Oryza longistaminata OLONG_013887 I
OLONG_014842 Oryza longistaminata OLONG_014842 I
OMERI01G05960 Oryza meridionalis OMERI01G05960 I
OMERI01G06100 Oryza meridionalis OMERI01G06100 I
OMERI05G05690 Oryza meridionalis OMERI05G05690 I
OMERI05G23670 Oryza meridionalis OMERI05G23670 I
OMERI08G00440 Oryza meridionalis OMERI08G00440 I
ONIVA01G06510 Oryza nivara ONIVA01G06510 I
ONIVA01G06840 Oryza nivara ONIVA01G06840 I
ONIVA05G06820 Oryza nivara ONIVA05G06820 I
ONIVA05G29740 Oryza nivara ONIVA05G29740 I
ONIVA06G02390 Oryza nivara ONIVA06G02390 I
ONIVA10G21060 Oryza nivara ONIVA10G21060 I
OPUNC01G05570 Oryza punctata OPUNC01G05570 I
OPUNC01G05740 Oryza punctata OPUNC01G05740 I
OPUNC05G05650 Oryza punctata OPUNC05G05650 I
OPUNC05G25370 Oryza punctata OPUNC05G25370 I
OPUNC05G25400 Oryza punctata OPUNC05G25400 I
OPUNC08G02750 Oryza punctata OPUNC08G02750 I
OPUNC10G16890 Oryza punctata OPUNC10G16890 I
ORGLA01G0053500 Oryza glaberrima ORGLA01G0053500 I
ORGLA01G0055800 Oryza glaberrima ORGLA01G0055800 I
ORGLA05G0055700 Oryza glaberrima ORGLA05G0055700 I
ORGLA05G0241200 Oryza glaberrima ORGLA05G0241200 I
ORGLA08G0023800 Oryza glaberrima ORGLA08G0023800 I
ORGLA10G0136800 Oryza glaberrima ORGLA10G0136800 I
ORUFI01G06450 Oryza rufipogon ORUFI01G06450 I
ORUFI05G29720 Oryza rufipogon ORUFI05G29720 I
ORUFI08G03370 Oryza rufipogon ORUFI08G03370 I
OS01G0192300 Oryza sativa OS01G0192300 I
OS05G0589400 Oryza sativa OS05G0589400 I
OS08G0151000 Oryza sativa OS08G0151000 I
PGSC0003DMG400000340 Solanum tuberosum PGSC0003DMG400000340 I
POPTR_0001s11730 Populus trichocarpa POPTR_0001s11730 I
POPTR_0006s15480 Populus trichocarpa POPTR_0006s15480 I
POPTR_0015s08020 Populus trichocarpa POPTR_0015s08020 I
PRUPE_ppa008425mg Prunus persica PRUPE_ppa008425mg I
PRUPE_ppa010092mg Prunus persica PRUPE_ppa010092mg I
Sb03g003100 Sorghum bicolor Sb03g003100 I
Sb07g003330 Sorghum bicolor Sb07g003330 I
scaffold_800056.1 Arabidopsis lyrata scaffold_800056.1 I
scaffold_802240.1 Arabidopsis lyrata scaffold_802240.1 I
SELMODRAFT_130556 Selaginella moellendorffii SELMODRAFT_130556 I
SELMODRAFT_131017 Selaginella moellendorffii SELMODRAFT_131017 I
SELMODRAFT_439294 Selaginella moellendorffii SELMODRAFT_439294 I
SELMODRAFT_445372 Selaginella moellendorffii SELMODRAFT_445372 I
Si002353m.g Setaria italica Si002353m.g I
Si014031m.g Setaria italica Si014031m.g I
Si022796m.g Setaria italica Si022796m.g I
Solyc12g008800.1 Solanum lycopersicum Solyc12g008800.1 I
TCM_010118 Theobroma cacao TCM_010118 I
TCM_014838 Theobroma cacao TCM_014838 I
TCM_037276 Theobroma cacao TCM_037276 I
TCM_037687 Theobroma cacao TCM_037687 I
Traes_3AS_4DF357170 Triticum aestivum Traes_3AS_4DF357170 I
TRAES3BF096900180CFD_g Triticum aestivum TRAES3BF096900180CFD_g I
Traes_7AL_9E45828B0 Triticum aestivum Traes_7AL_9E45828B0 I
Traes_7BL_C184D0525 Triticum aestivum Traes_7BL_C184D0525 I
Traes_7DL_6B4FA59C6 Triticum aestivum Traes_7DL_6B4FA59C6 I
TRIUR3_24105 Triticum urartu TRIUR3_24105 I
TRIUR3_35146 Triticum urartu TRIUR3_35146 I
VIT_01s0026g01050 Vitis vinifera VIT_01s0026g01050 I
VIT_11s0016g02410 Vitis vinifera VIT_11s0016g02410 I
VIT_18s0001g01170 Vitis vinifera VIT_18s0001g01170 I
Ca_05889 Cicer arietinum Ca_05889 I
Ca_15538 Cicer arietinum Ca_15538 I
Cla000916 Citrullus lanatus Cla000916 I
Cla010879 Citrullus lanatus Cla010879 I
Pm019550 Prunus mume Pm019550 I
Pm027228 Prunus mume Pm027228 I
29736.m002089 Ricinus communis 29736.m002089 I
29912.m005387 Ricinus communis 29912.m005387 I
30147.m014337 Ricinus communis 30147.m014337 I
cassava18869.valid.m1 Manihot esculenta cassava18869.valid.m1 I
cassava22868.valid.m1 Manihot esculenta cassava22868.valid.m1 I
cassava29981.valid.m1 Manihot esculenta cassava29981.valid.m1 I
cassava43855.valid.m1 Manihot esculenta cassava43855.valid.m1 I
Cucsa.094040 Cucumis sativus Cucsa.094040 I
Cucsa.361050 Cucumis sativus Cucsa.361050 I
Cucsa.395160 Cucumis sativus Cucsa.395160 I
e_gw1.89.66.1 Physcomitrella patens e_gw1.89.66.1 I
estExt_fgenesh1_pg.C_1880060 Physcomitrella patens estExt_fgenesh1_pg.C_1880060 I
fgenesh1_pg.scaffold_66000046 Physcomitrella patens fgenesh1_pg.scaffold_66000046 I
fgenesh1_pg.scaffold_66000048 Physcomitrella patens fgenesh1_pg.scaffold_66000048 I
gw1.89.65.1 Physcomitrella patens gw1.89.65.1 I
mgf008910m Mimulus guttatus mgf008910m I
mgf011892m Mimulus guttatus mgf011892m I
mgf023843m Mimulus guttatus mgf023843m I
Aquca_001_00103 Aquilegia coerulea Aquca_001_00103 I
Aquca_002_00384 Aquilegia coerulea Aquca_002_00384 I
Aquca_025_00167 Aquilegia coerulea Aquca_025_00167 I
Aquca_053_00029 Aquilegia coerulea Aquca_053_00029 I
Bostr.10273s0355 Boechera stricta Bostr.10273s0355 I
Bostr.14419s0032 Boechera stricta Bostr.14419s0032 I
Bostr.26833s0072 Boechera stricta Bostr.26833s0072 I
Bostr.26833s0577 Boechera stricta Bostr.26833s0577 I
Cagra.0542s0058 Capsella grandiflora Cagra.0542s0058 I
Cagra.10840s0008 Capsella grandiflora Cagra.10840s0008 I
Cagra.1415s0002 Capsella grandiflora Cagra.1415s0002 I
Cagra.4138s0007 Capsella grandiflora Cagra.4138s0007 I
Carubv10020813m.g Capsella rubella Carubv10020813m.g I
Carubv10026634m.g Capsella rubella Carubv10026634m.g I
Carubv10026949m.g Capsella rubella Carubv10026949m.g I
Carubv10028616m.g Capsella rubella Carubv10028616m.g I
Ciclev10006771m.g Citrus clementina Ciclev10006771m.g I
Ciclev10032167m.g Citrus clementina Ciclev10032167m.g I
Eucgr.B00377 Eucalyptus grandis Eucgr.B00377 I
Eucgr.B02575 Eucalyptus grandis Eucgr.B02575 I
Eucgr.C00908 Eucalyptus grandis Eucgr.C00908 I
Eucgr.C03026 Eucalyptus grandis Eucgr.C03026 I
Eucgr.C03658 Eucalyptus grandis Eucgr.C03658 I
Eucgr.D00726 Eucalyptus grandis Eucgr.D00726 I
Eucgr.K00122 Eucalyptus grandis Eucgr.K00122 I
Eucgr.K02897 Eucalyptus grandis Eucgr.K02897 I
evm.TU.supercontig_13.246 Carica papaya evm.TU.supercontig_13.246 I
evm.TU.supercontig_13.248 Carica papaya evm.TU.supercontig_13.248 I
gene11419-v1.0-hybrid Fragaria vesca gene11419-v1.0-hybrid I
gene21159-v1.0-hybrid Fragaria vesca gene21159-v1.0-hybrid I
Gorai.006G274300 Gossypium raimondii Gorai.006G274300 I
Gorai.007G378300 Gossypium raimondii Gorai.007G378300 I
Gorai.009G030900 Gossypium raimondii Gorai.009G030900 I
Gorai.010G081800 Gossypium raimondii Gorai.010G081800 I
Lus10013289.g Linum usitatissimum Lus10013289.g I
Lus10027781.g Linum usitatissimum Lus10027781.g I
Lus10030813.g Linum usitatissimum Lus10030813.g I
Lus10036678.g Linum usitatissimum Lus10036678.g I
MDP0000162533 Malus domestica MDP0000162533 I
MDP0000297148 Malus domestica MDP0000297148 I
MDP0000537549 Malus domestica MDP0000537549 I
MDP0000875621 Malus domestica MDP0000875621 I
orange1.1g021351m.g Citrus sinensis orange1.1g021351m.g I
orange1.1g048263m.g Citrus sinensis orange1.1g048263m.g I
Pavir.Ca00821 Panicum virgatum Pavir.Ca00821 I
Pavir.Ea00361 Panicum virgatum Pavir.Ea00361 I
Pavir.Fa01954 Panicum virgatum Pavir.Fa01954 I
Pavir.J19866 Panicum virgatum Pavir.J19866 I
Pavir.J37988 Panicum virgatum Pavir.J37988 I
SapurV1A.0161s0200 Salix purpurea SapurV1A.0161s0200 I
SapurV1A.1274s0030 Salix purpurea SapurV1A.1274s0030 I
Thhalv10000932m.g Eutrema salsugineum Thhalv10000932m.g I
Thhalv10014394m.g Eutrema salsugineum Thhalv10014394m.g I
Thhalv10019007m.g Eutrema salsugineum Thhalv10019007m.g I
Thhalv10025432m.g Eutrema salsugineum Thhalv10025432m.g I
PK11714.1 Cannabis sativa PK11714.1 I
chr2.CM0373.230.nd Lotus japonicus chr2.CM0373.230.nd I
chr4.CM0004.450.nd Lotus japonicus chr4.CM0004.450.nd I
PDK_20s1503511g002 Phoenix dactylifera PDK_20s1503511g002 I
PDK_20s1532501g001 Phoenix dactylifera PDK_20s1532501g001 I