cassava32690.m1 (Manihot esculenta)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 cassava32690.m1 T246463_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.818 0.818
LOB
M06966_2.00 		Arabidopsis thaliana
NVCGGCGGHRRHDRMGGMGGH
DCCKCCKYHDYYDCCGCCGBN		 Dap-seq
OMalley et al.(2016)
LOB_col_a 		0.727 0.727
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava32690.m1 LOB 7 105

Links

Other LOB family TFs
Other Manihot esculenta TFs

290 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB5 Taeniopygia guttata ENSTGUG00000007188 N
ENSNLEG00000003629 Nomascus leucogenys ENSNLEG00000003629 N
ZBTB5 Oryctolagus cuniculus ENSOCUG00000007041 N
ZBTB5 Otolemur garnettii ENSOGAG00000012980 N
ENSONIG00000008925 Oreochromis niloticus ENSONIG00000008925 N
ZBTB5 Ochotona princeps ENSOPRG00000014200 N
ZBTB5 Oryzias latipes ENSORLG00000005151 N
ENSPFOG00000019621 Poecilia formosa ENSPFOG00000019621 N
ENSPPYG00000019062 Pongo abelii ENSPPYG00000019062 N
ENSPSIG00000003260 Pelodiscus sinensis ENSPSIG00000003260 N
ZBTB5 Pan troglodytes ENSPTRG00000020941 N
ZBTB5 Pteropus vampyrus ENSPVAG00000007939 N
Zbtb5 Rattus norvegicus ENSRNOG00000012726 N
ZBTB5 Sorex araneus ENSSARG00000012933 N
ENSSHAG00000015981 Sarcophilus harrisii ENSSHAG00000015981 N
ENSSTOG00000027806 Ictidomys tridecemlineatus ENSSTOG00000027806 N
Zbtb5 Mus musculus ENSMUSG00000049657 N
ZBTB5 Tetraodon nigroviridis ENSTNIG00000017813 N
ZBTB5 Takifugu rubripes ENSTRUG00000006314 N
ENSTSYG00000014359 Tarsius syrichta ENSTSYG00000014359 N
ZBTB5 Tursiops truncatus ENSTTRG00000008293 N
Afo_R005132 Aptenodytes forsteri Afo_R005132 N
Alligator_sinensis_CCG012870.1 Alligator sinensis Alligator_sinensis_CCG012870.1 N
Cmyd_10005483 Chelonia mydas Cmyd_10005483 N
ENSP00000307604-D1 Bos grunniens ENSP00000307604-D1 N
ENSP00000307604 Macaca fascicularis ENSP00000307604 N
Myotis_brandtii_ZBTB5_10017822 Myotis brandtii Myotis_brandtii_ZBTB5_10017822 N
Pvit_15550 Pogona vitticeps Pvit_15550 N
Tal_R000100 Tyto alba Tal_R000100 N
zbtb5 Xenopus tropicalis XB-GENE-1015618 N
zbtb5.L Xenopus laevis XB-GENE-1015624 N
ZBTB5 Felis catus ENSFCAG00000013080 N
ENSAMXG00000004140 Astyanax mexicanus ENSAMXG00000004140 N
ENSAPLG00000001994 Anas platyrhynchos ENSAPLG00000001994 N
ENSAPLG00000002091 Anas platyrhynchos ENSAPLG00000002091 N
ZBTB5 Bos taurus ENSBTAG00000007761 N
ZBTB5 Canis familiaris ENSCAFG00000029817 N
ZBTB5 Choloepus hoffmanni ENSCHOG00000007877 N
ZBTB5 Callithrix jacchus ENSCJAG00000010502 N
ENSCSAG00000000456 Chlorocebus sabaeus ENSCSAG00000000456 N
ZBTB5 Dasypus novemcinctus ENSDNOG00000010253 N
Zbtb5 Dipodomys ordii ENSDORG00000013170 N
ZBTB5 Equus caballus ENSECAG00000004450 N
ZBTB5 Erinaceus europaeus ENSEEUG00000011920 N
ZBTB5 Echinops telfairi ENSETEG00000002372 N
ENSFALG00000012967 Ficedula albicollis ENSFALG00000012967 N
ZBTB5 Anolis carolinensis ENSACAG00000011965 N
ZBTB5 Homo sapiens ENSG00000168795 N
ZBTB5 Gallus gallus ENSGALG00000005354 N
ZBTB5 Gorilla gorilla ENSGGOG00000003712 N
ENSGMOG00000003377 Gadus morhua ENSGMOG00000003377 N
ENSLACG00000004172 Latimeria chalumnae ENSLACG00000004172 N
ZBTB5 Loxodonta africana ENSLAFG00000014479 N
ENSLOCG00000012855 Lepisosteus oculatus ENSLOCG00000012855 N
ENSMEUG00000011041 Macropus eugenii ENSMEUG00000011041 N
ZBTB5 Meleagris gallopavo ENSMGAG00000016120 N
ENSMICG00000003671 Microcebus murinus ENSMICG00000003671 N
ZBTB5 Myotis lucifugus ENSMLUG00000012686 N
ZBTB5 Macaca mulatta ENSMMUG00000017894 N
ZBTB5 Monodelphis domestica ENSMODG00000025213 N
ENSMPUG00000018533 Mustela putorius furo ENSMPUG00000018533 N