Ciclev10029274m.g (Citrus clementina)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Ciclev10029274m.g T246819_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10029274m LOB 12 114
Ciclev10029275m LOB 12 114

Links

Other LOB family TFs
Other Citrus clementina TFs

217 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00137p00051070 Amborella trichopoda AMTR_s00137p00051070 N 0.765
AMTR_s00137p00087340 Amborella trichopoda AMTR_s00137p00087340 N 0.827
LBD38 Arabidopsis thaliana AT3G49940 N 0.857
LBD39 Arabidopsis thaliana AT4G37540 N 0.776
LBD37 Arabidopsis thaliana AT5G67420 N 0.816
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.704
BGIOSGA010258 Oryza indica BGIOSGA010258 N 0.724
BGIOSGA010454 Oryza indica BGIOSGA010454 N 0.786
BGIOSGA026049 Oryza indica BGIOSGA026049 N 0.722
Bo1g003550 Brassica oleracea Bo1g003550 N 0.786
Bo2g168020 Brassica oleracea Bo2g168020 N 0.827
Bo5g132850 Brassica oleracea Bo5g132850 N 0.816
Bo7g063630 Brassica oleracea Bo7g063630 N 0.837
Bo7g099150 Brassica oleracea Bo7g099150 N 0.827
Bo7g118580 Brassica oleracea Bo7g118580 N 0.745
Bo8g079200 Brassica oleracea Bo8g079200 N 0.816
Bo9g018500 Brassica oleracea Bo9g018500 N 0.735
Bo9g019150 Brassica oleracea Bo9g019150 N 0.816
Bra011772 Brassica rapa Bra011772 N 0.786
Bra012164 Brassica rapa Bra012164 N 0.837
Bra012913 Brassica rapa Bra012913 N 0.816
Bra017831 Brassica rapa Bra017831 N 0.745
Bra031833 Brassica rapa Bra031833 N 0.827
Bra036040 Brassica rapa Bra036040 N 0.806
Bra037847 Brassica rapa Bra037847 N 0.827
BRADI1G14780 Brachypodium distachyon BRADI1G14780 N 0.714
BRADI1G22920 Brachypodium distachyon BRADI1G22920 N 0.714
LBD39 Arabidopsis lyrata fgenesh2_kg.7__297__AT4G37540.1 N 0.776
LBD37 Arabidopsis lyrata fgenesh2_kg.8__2670__AT5G67420.1 N 0.827
GLYMA01G40010 Glycine max GLYMA01G40010 N 0.806
GLYMA05G22120 Glycine max GLYMA05G22120 N 0.827
GLYMA10G40421 Glycine max GLYMA10G40421 N 0.755
GLYMA11G05280 Glycine max GLYMA11G05280 N 0.806
GLYMA14G09750 Glycine max GLYMA14G09750 N 0.714
GLYMA17G17540 Glycine max GLYMA17G17540 N 0.806
GLYMA17G35440 Glycine max GLYMA17G35440 N 0.701
GLYMA20G26910 Glycine max GLYMA20G26910 N 0.773
GRMZM2G017319 Zea mays GRMZM2G017319 N 0.717
GRMZM2G044902 Zea mays GRMZM2G044902 N 0.765
GRMZM2G177110 Zea mays GRMZM2G177110 N 0.714
GSMUA_Achr3G18860_001 Musa acuminata GSMUA_Achr3G18860_001 N 0.776
GSMUA_Achr3G30130_001 Musa acuminata GSMUA_Achr3G30130_001 N 0.776
GSMUA_Achr4G14150_001 Musa acuminata GSMUA_Achr4G14150_001 N 0.776
GSMUA_Achr7G26260_001 Musa acuminata GSMUA_Achr7G26260_001 N 0.765
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.704
LPERR03G19360 Leersia perrieri LPERR03G19360 N 0.755
LPERR03G21440 Leersia perrieri LPERR03G21440 N 0.714
LPERR07G17890 Leersia perrieri LPERR07G17890 N 0.750
MLOC_11838 Hordeum vulgare MLOC_11838 N 0.704
MLOC_51325 Hordeum vulgare MLOC_51325 N 0.707
MTR_1g106420 Medicago truncatula MTR_1g106420 N 0.765
MTR_4g095600 Medicago truncatula MTR_4g095600 N 0.816
MTR_5g015880 Medicago truncatula MTR_5g015880 N 0.806
OB01G11830 Oryza brachyantha OB01G11830 N 0.704
OB03G31560 Oryza brachyantha OB03G31560 N 0.765
OB03G33950 Oryza brachyantha OB03G33950 N 0.735
OBART01G01940 Oryza barthii OBART01G01940 N 0.704
OBART03G22820 Oryza barthii OBART03G22820 N 0.786
OBART03G25820 Oryza barthii OBART03G25820 N 0.724
OBART07G20600 Oryza barthii OBART07G20600 N 0.722
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.704
OGLUM03G23580 Oryza glumaepatula OGLUM03G23580 N 0.786
OGLUM03G26640 Oryza glumaepatula OGLUM03G26640 N 0.724
OGLUM07G20380 Oryza glumaepatula OGLUM07G20380 N 0.722
OLONG_008015 Oryza longistaminata OLONG_008015 N 0.704
OLONG_015384 Oryza longistaminata OLONG_015384 N 0.786
OMERI03G20600 Oryza meridionalis OMERI03G20600 N 0.786
OMERI07G17270 Oryza meridionalis OMERI07G17270 N 0.722
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.704
ONIVA03G24370 Oryza nivara ONIVA03G24370 N 0.786
ONIVA03G26970 Oryza nivara ONIVA03G26970 N 0.724
ONIVA07G19050 Oryza nivara ONIVA07G19050 N 0.722
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.704
OPUNC03G21330 Oryza punctata OPUNC03G21330 N 0.786
OPUNC03G23160 Oryza punctata OPUNC03G23160 N 0.724
OPUNC07G19440 Oryza punctata OPUNC07G19440 N 0.722
OPUNC07G19460 Oryza punctata OPUNC07G19460 N 0.722
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.704
ORGLA03G0213800 Oryza glaberrima ORGLA03G0213800 N 0.786
ORGLA03G0239300 Oryza glaberrima ORGLA03G0239300 N 0.724
ORGLA07G0157700 Oryza glaberrima ORGLA07G0157700 N 0.722
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.704
ORUFI03G23490 Oryza rufipogon ORUFI03G23490 N 0.786
ORUFI03G26700 Oryza rufipogon ORUFI03G26700 N 0.724
ORUFI07G21460 Oryza rufipogon ORUFI07G21460 N 0.722
OS03G0445700 Oryza sativa OS03G0445700 N 0.786
OS03G0609500 Oryza sativa OS03G0609500 N 0.724
OS07G0589000 Oryza sativa OS07G0589000 N 0.722
PGSC0003DMG400021509 Solanum tuberosum PGSC0003DMG400021509 N 0.714
PGSC0003DMG400024936 Solanum tuberosum PGSC0003DMG400024936 N 0.837
PGSC0003DMG400025752 Solanum tuberosum PGSC0003DMG400025752 N 0.827
POPTR_0001s30280 Populus trichocarpa POPTR_0001s30280 N 0.837
POPTR_0002s12020 Populus trichocarpa POPTR_0002s12020 N 0.755
POPTR_0005s18900 Populus trichocarpa POPTR_0005s18900 N 0.837
POPTR_0007s10010 Populus trichocarpa POPTR_0007s10010 N 0.837
POPTR_0009s09270 Populus trichocarpa POPTR_0009s09270 N 0.827
POPTR_0014s01770 Populus trichocarpa POPTR_0014s01770 N 0.758
PRUPE_ppa014964mg Prunus persica PRUPE_ppa014964mg N 0.776
PRUPE_ppa022806mg Prunus persica PRUPE_ppa022806mg N 0.786
Sb01g031790 Sorghum bicolor Sb01g031790 N 0.763
Sb02g038030 Sorghum bicolor Sb02g038030 N 0.755
LBD38 Arabidopsis lyrata scaffold_502015.1 N 0.847
SELMODRAFT_105005 Selaginella moellendorffii SELMODRAFT_105005 N 0.796
SELMODRAFT_27399 Selaginella moellendorffii SELMODRAFT_27399 N 0.796
SELMODRAFT_37532 Selaginella moellendorffii SELMODRAFT_37532 N 0.742
SELMODRAFT_37566 Selaginella moellendorffii SELMODRAFT_37566 N 0.763
SELMODRAFT_37570 Selaginella moellendorffii SELMODRAFT_37570 N 0.763
SELMODRAFT_61520 Selaginella moellendorffii SELMODRAFT_61520 N 0.745
Si031011m.g Setaria italica Si031011m.g N 0.755
Si037275m.g Setaria italica Si037275m.g N 0.717
Solyc01g107190.2 Solanum lycopersicum Solyc01g107190.2 N 0.816
Solyc02g092550.2 Solanum lycopersicum Solyc02g092550.2 N 0.837
Solyc04g077990.2 Solanum lycopersicum Solyc04g077990.2 N 0.714
TCM_000766 Theobroma cacao TCM_000766 N 0.827
TCM_007211 Theobroma cacao TCM_007211 N 0.847
TCM_034722 Theobroma cacao TCM_034722 N 0.735
Traes_2AS_942884399 Triticum aestivum Traes_2AS_942884399 N 0.704
Traes_2BS_5DF7F4FEE Triticum aestivum Traes_2BS_5DF7F4FEE N 0.714
Traes_4AL_7241716B6 Triticum aestivum Traes_4AL_7241716B6 N 0.717
Traes_4BL_D44ACD58E Triticum aestivum Traes_4BL_D44ACD58E N 0.725
Traes_4BS_3BCDF0612 Triticum aestivum Traes_4BS_3BCDF0612 N 0.707
Traes_4DS_9575221BB Triticum aestivum Traes_4DS_9575221BB N 0.707
TRIUR3_28321 Triticum urartu TRIUR3_28321 N 0.717
VIT_03s0091g00670 Vitis vinifera VIT_03s0091g00670 N 0.837
VIT_07s0129g00330 Vitis vinifera VIT_07s0129g00330 N 0.786
VIT_18s0001g09250 Vitis vinifera VIT_18s0001g09250 N 0.755
Ca_02208 Cicer arietinum Ca_02208 N 0.796
Ca_09342 Cicer arietinum Ca_09342 N 0.816
Cla014228 Citrullus lanatus Cla014228 N 0.816
Cla020920 Citrullus lanatus Cla020920 N 0.755
Pm002404 Prunus mume Pm002404 N 0.758
Pm005389 Prunus mume Pm005389 N 0.776
Pm021281 Prunus mume Pm021281 N 0.776
28152.m000905 Ricinus communis 28152.m000905 N 0.856
29661.m000902 Ricinus communis 29661.m000902 N 0.837
30170.m013752 Ricinus communis 30170.m013752 N 0.765
cassava22449.valid.m1 Manihot esculenta cassava22449.valid.m1 N 0.776
cassava226.valid.m1 Manihot esculenta cassava226.valid.m1 N 0.827
cassava35733.valid.m1 Manihot esculenta cassava35733.valid.m1 N 0.765
cassava7497.valid.m1 Manihot esculenta cassava7497.valid.m1 N 0.827
cassava9459.m1 Manihot esculenta cassava9459.m1 N 0.845
Cucsa.103050 Cucumis sativus Cucsa.103050 N 0.816
Cucsa.352730 Cucumis sativus Cucsa.352730 N 0.753
e_gw1.19.226.1 Physcomitrella patens e_gw1.19.226.1 N 0.796
estExt_gwp_gw1.C_2030014 Physcomitrella patens estExt_gwp_gw1.C_2030014 N 0.755
gw1.167.132.1 Physcomitrella patens gw1.167.132.1 N 0.806
gw1.41.215.1 Physcomitrella patens gw1.41.215.1 N 0.776
mgf007319m Mimulus guttatus mgf007319m N 0.755
mgf016023m Mimulus guttatus mgf016023m N 0.814
mgf016064m Mimulus guttatus mgf016064m N 0.796
mgf017790m Mimulus guttatus mgf017790m N 0.712
Aquca_042_00143 Aquilegia coerulea Aquca_042_00143 N 0.796
Bostr.0568s0168 Boechera stricta Bostr.0568s0168 N 0.827
Bostr.6864s0247 Boechera stricta Bostr.6864s0247 N 0.837
Bostr.7867s1612 Boechera stricta Bostr.7867s1612 N 0.765
Cagra.0342s0030 Capsella grandiflora Cagra.0342s0030 N 0.827
Cagra.10957s0002 Capsella grandiflora Cagra.10957s0002 N 0.806
Cagra.4491s0014 Capsella grandiflora Cagra.4491s0014 N 0.847
Carubv10005616m.g Capsella rubella Carubv10005616m.g N 0.806
Carubv10017944m.g Capsella rubella Carubv10017944m.g N 0.847
Carubv10027507m.g Capsella rubella Carubv10027507m.g N 0.827
Ciclev10003746m.g Citrus clementina Ciclev10003746m.g N 0.735
Ciclev10026374m.g Citrus clementina Ciclev10026374m.g N 0.827
Eucgr.F00115 Eucalyptus grandis Eucgr.F00115 N 0.701
Eucgr.G01261 Eucalyptus grandis Eucgr.G01261 N 0.755
Eucgr.H02293 Eucalyptus grandis Eucgr.H02293 N 0.837
evm.TU.supercontig_106.63 Carica papaya evm.TU.supercontig_106.63 N 0.878
evm.TU.supercontig_21.100 Carica papaya evm.TU.supercontig_21.100 N 0.776
evm.TU.supercontig_6.40 Carica papaya evm.TU.supercontig_6.40 N 0.827
gene02557-v1.0-hybrid Fragaria vesca gene02557-v1.0-hybrid N 0.724
gene05722-v1.0-hybrid Fragaria vesca gene05722-v1.0-hybrid N 0.827
gene25541-v1.0-hybrid Fragaria vesca gene25541-v1.0-hybrid N 0.837
Gorai.005G232500 Gossypium raimondii Gorai.005G232500 N 0.847
Gorai.007G056300 Gossypium raimondii Gorai.007G056300 N 0.806
Gorai.007G222000 Gossypium raimondii Gorai.007G222000 N 0.816
Gorai.008G081100 Gossypium raimondii Gorai.008G081100 N 0.806
Gorai.009G218800 Gossypium raimondii Gorai.009G218800 N 0.724
Gorai.010G025100 Gossypium raimondii Gorai.010G025100 N 0.724
Lus10007758.g Linum usitatissimum Lus10007758.g N 0.755
Lus10011530.g Linum usitatissimum Lus10011530.g N 0.806
Lus10018697.g Linum usitatissimum Lus10018697.g N 0.755
Lus10019292.g Linum usitatissimum Lus10019292.g N 0.806
MDP0000139025 Malus domestica MDP0000139025 N 0.755
MDP0000151330 Malus domestica MDP0000151330 N 0.814
MDP0000239820 Malus domestica MDP0000239820 N 0.814
MDP0000247079 Malus domestica MDP0000247079 N 0.735
MDP0000261146 Malus domestica MDP0000261146 N 0.735
MDP0000487015 Malus domestica MDP0000487015 N 0.745
MDP0000747679 Malus domestica MDP0000747679 N 0.745
MDP0000794101 Malus domestica MDP0000794101 N 0.786
orange1.1g026365m.g Citrus sinensis orange1.1g026365m.g N 0.827
orange1.1g029809m.g Citrus sinensis orange1.1g029809m.g N 0.735
orange1.1g029970m.g Citrus sinensis orange1.1g029970m.g N 0.894
Pavir.Ba01055 Panicum virgatum Pavir.Ba01055 N 0.735
Pavir.Bb01170 Panicum virgatum Pavir.Bb01170 N 0.755
Pavir.Ia03080 Panicum virgatum Pavir.Ia03080 N 0.755
Pavir.J16587 Panicum virgatum Pavir.J16587 N 0.717
Pavir.J18418 Panicum virgatum Pavir.J18418 N 0.765
SapurV1A.0019s0260 Salix purpurea SapurV1A.0019s0260 N 0.827
SapurV1A.0116s0210 Salix purpurea SapurV1A.0116s0210 N 0.837
SapurV1A.0336s0110 Salix purpurea SapurV1A.0336s0110 N 0.806
SapurV1A.0476s0230 Salix purpurea SapurV1A.0476s0230 N 0.788
SapurV1A.0845s0090 Salix purpurea SapurV1A.0845s0090 N 0.765
SapurV1A.2860s0030 Salix purpurea SapurV1A.2860s0030 N 0.765
Thhalv10004811m.g Eutrema salsugineum Thhalv10004811m.g N 0.827
Thhalv10010666m.g Eutrema salsugineum Thhalv10010666m.g N 0.837
Thhalv10026086m.g Eutrema salsugineum Thhalv10026086m.g N 0.786
PK03075.1 Cannabis sativa PK03075.1 N 0.794
PK03977.1 Cannabis sativa PK03977.1 N 0.755
PK15647.1 Cannabis sativa PK15647.1 N 0.864
PK25954.1 Cannabis sativa PK25954.1 N 0.739
PK29811.1 Cannabis sativa PK29811.1 N 0.837
chr1.CM0088.550.nd Lotus japonicus chr1.CM0088.550.nd N 0.735
chr4.CM0128.270.nc Lotus japonicus chr4.CM0128.270.nc N 0.827
chr5.CM0200.600.nd Lotus japonicus chr5.CM0200.600.nd N 0.786
LjSGA_036652.1 Lotus japonicus LjSGA_036652.1 N 0.741