gene09561-v1.0-hybrid (Fragaria vesca)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 gene09561-v1.0-hybrid T246913_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
mrna09561.1-v1.0-hybrid LOB 80 178

Links

Other LOB family TFs
Other Fragaria vesca TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava19740.m1 Manihot esculenta cassava19740.m1 N 0.707
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N
SapurV1A.0138s0160 Salix purpurea SapurV1A.0138s0160 N
orange1.1g042591m.g Citrus sinensis orange1.1g042591m.g N
MDP0000216231 Malus domestica MDP0000216231 N 0.798
MDP0000153290 Malus domestica MDP0000153290 N 0.808
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N
Gorai.003G070700 Gossypium raimondii Gorai.003G070700 N
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.707
Ciclev10029958m.g Citrus clementina Ciclev10029958m.g N
cassava35156.m1 Manihot esculenta cassava35156.m1 N
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N
30147.m014053 Ricinus communis 30147.m014053 N
Pm024623 Prunus mume Pm024623 N 0.808
Ca_15323 Cicer arietinum Ca_15323 N
SCP Vitis vinifera VIT_17s0000g05490 N
TCM_030184 Theobroma cacao TCM_030184 N
PRUPE_ppa025223mg Prunus persica PRUPE_ppa025223mg N 0.808
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N
POPTR_0012s07390 Populus trichocarpa POPTR_0012s07390 N
MTR_4g107450 Medicago truncatula MTR_4g107450 N