Bo6g033010 (Brassica oleracea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 Bo6g033010 T247989_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASIL1
M02264_2.00 		Arabidopsis thaliana
NNDHCGDHNN
NNDHCGDHNN		 PBM
Weirauch et al.(2014)
pTH7464 		0.935 0.758
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g033010.1 MADF 86 157

Links

Other MADF family TFs
Other Brassica oleracea TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPRG_07347 Saprolegnia parasitica SPRG_07347 N
ALNC14_036870 Albugo laibachii ALNC14_036870 N
F443_05618 Phytophthora parasitica F443_05618 N
fgenesh_scip_prom.28083.9880 Phytophthora lateralis fgenesh_scip_prom.28083.9880 N
fgenesh_scip_prom.46568.10844 Phytophthora kernoviae fgenesh_scip_prom.46568.10844 N
maker-pag1_scaffold_104-snap-gene-0.37 Pythium aphanidermatum maker-pag1_scaffold_104-snap-gene-0.37 N
maker-par_contig_359-snap-gene-0.8 Pythium arrhenomanes maker-par_contig_359-snap-gene-0.8 N
maker-pir_contig_315-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_315-fgenesh-gene-0.0 N
maker-piw_contig_348-snap-gene-0.7 Pythium iwayamai maker-piw_contig_348-snap-gene-0.7 N
maker-pve_contig_589-fgenesh-gene-0.0 Pythium vexans maker-pve_contig_589-fgenesh-gene-0.0 N
Phyra74345 Phytophthora ramorum Phyra74345 N
Phyra84059 Phytophthora ramorum Phyra84059 N
Physo127312 Phytophthora sojae Physo127312 N
PYU1_G001938 Pythium ultimum PYU1_G001938 N
e_gw1.3.305.1 Phytophthora capsici e_gw1.3.305.1 N