GSMUA_Achr11G03520_001 (Musa acuminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 GSMUA_Achr11G03520_001 T249154_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.891 0.755
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.891 0.755
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr11P03520_001 MADF 94 165
GSMUA_Achr11P03520_001 MADF 392 464

Links

Other MADF family TFs
Other Musa acuminata TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.13611s0003 Capsella grandiflora Cagra.13611s0003 N
gene31106-v1.0-hybrid Fragaria vesca gene31106-v1.0-hybrid N
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N
gene15718-v1.0-hybrid Fragaria vesca gene15718-v1.0-hybrid N
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N
Ciclev10025036m.g Citrus clementina Ciclev10025036m.g N
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N
Carubv10019720m.g Capsella rubella Carubv10019720m.g N
Carubv10008021m.g Capsella rubella Carubv10008021m.g N
Cagra.1725s0137 Capsella grandiflora Cagra.1725s0137 N
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N
mgf025287m Mimulus guttatus mgf025287m N
Cucsa.036140 Cucumis sativus Cucsa.036140 N
cassava11655.m1 Manihot esculenta cassava11655.m1 N
Pm013703 Prunus mume Pm013703 N
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N
VIT_09s0002g07340 Vitis vinifera VIT_09s0002g07340 N
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N
PK27100.1 Cannabis sativa PK27100.1 N
Thhalv10002435m.g Eutrema salsugineum Thhalv10002435m.g N
SapurV1A.0344s0280 Salix purpurea SapurV1A.0344s0280 N
SapurV1A.0199s0250 Salix purpurea SapurV1A.0199s0250 N
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N
SapurV1A.0034s0250 Salix purpurea SapurV1A.0034s0250 N
Pavir.J31170 Panicum virgatum Pavir.J31170 N
Pavir.J05554 Panicum virgatum Pavir.J05554 N
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N
orange1.1g005485m.g Citrus sinensis orange1.1g005485m.g N
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N
MDP0000394762 Malus domestica MDP0000394762 N
MDP0000197332 Malus domestica MDP0000197332 N
Lus10032337.g Linum usitatissimum Lus10032337.g N
Gorai.010G061500 Gossypium raimondii Gorai.010G061500 N
Gorai.004G107300 Gossypium raimondii Gorai.004G107300 N
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N
PGSC0003DMG400019816 Solanum tuberosum PGSC0003DMG400019816 N
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N
OB08G27850 Oryza brachyantha OB08G27850 N
OB08G27840 Oryza brachyantha OB08G27840 N
MLOC_75540 Hordeum vulgare MLOC_75540 N
MLOC_66012 Hordeum vulgare MLOC_66012 N
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N
POPTR_0001s20900 Populus trichocarpa POPTR_0001s20900 N
GSMUA_Achr10G16260_001 Musa acuminata GSMUA_Achr10G16260_001 N
GLYMA17G11981 Glycine max GLYMA17G11981 N
GLYMA13G22881 Glycine max GLYMA13G22881 N
GLYMA13G22855 Glycine max GLYMA13G22855 N
GLYMA07G03280 Glycine max GLYMA07G03280 N
fgenesh1_pm.C_scaffold_5000603 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5000603 N
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N
Bo4g137780 Brassica oleracea Bo4g137780 N
Sb02g043380 Sorghum bicolor Sb02g043380 N
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N
TCM_038144 Theobroma cacao TCM_038144 N
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N
Solyc03g116840.1 Solanum lycopersicum Solyc03g116840.1 N
Si034159m.g Setaria italica Si034159m.g N
Si000431m.g Setaria italica Si000431m.g N
HAT Arabidopsis thaliana AT3G42170 N
Sb01g009090 Sorghum bicolor Sb01g009090 N
PRUPE_ppa002495mg Prunus persica PRUPE_ppa002495mg N
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N
POPTR_0018s12690 Populus trichocarpa POPTR_0018s12690 N
POPTR_0018s12680 Populus trichocarpa POPTR_0018s12680 N
POPTR_0004s12810 Populus trichocarpa POPTR_0004s12810 N
POPTR_0004s12760 Populus trichocarpa POPTR_0004s12760 N
POPTR_0003s02610 Populus trichocarpa POPTR_0003s02610 N