MTR_1g098900 (Medicago truncatula)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 MTR_1g098900 T249454_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.851 0.707
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.851 0.707
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.838 0.707
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES62365 MADF 72 142
AES62365 MADF 466 540

Links

Other MADF family TFs
Other Medicago truncatula TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pag1_scaffold_15-snap-gene-0.94 Pythium aphanidermatum maker-pag1_scaffold_15-snap-gene-0.94 N
maker-piw_contig_52-fgenesh-gene-0.18 Pythium iwayamai maker-piw_contig_52-fgenesh-gene-0.18 N
PITG_09531 Phytophthora infestans PITG_09531 N
PITG_09534 Phytophthora infestans PITG_09534 N
PYU1_G013112 Pythium ultimum PYU1_G013112 N