OBART04G20290 (Oryza barthii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OBART04G20290 T249534_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.920 0.787
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.920 0.787
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART04G20290.1 MADF 87 158
OBART04G20290.1 MADF 445 514

Links

Other MADF family TFs
Other Oryza barthii TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SNOG_00399 Stagonospora nodorum SNOG_00399 N
COCC4DRAFT_126305 Bipolaris maydis COCC4DRAFT_126305 N
COCCADRAFT_479 Bipolaris zeicola COCCADRAFT_479 N
COCMIDRAFT_89478 Bipolaris oryzae COCMIDRAFT_89478 N
COCSADRAFT_35520 Bipolaris sorokiniana COCSADRAFT_35520 N
COCVIDRAFT_87173 Bipolaris victoriae COCVIDRAFT_87173 N
LEMA_P118230.1 Leptosphaeria maculans LEMA_P118230.1 N
PTRG_07178 Pyrenophora triticirepentis PTRG_07178 N
SETTUDRAFT_142926 Setosphaeria turcica SETTUDRAFT_142926 N
SNOG_00399 Phaeosphaeria nodorum SNOG_00399 N
e_gw1.4.588.1 Cochliobolus heterostrophus C5 e_gw1.4.588.1 N
AB06774.1 Alternaria brassicicola AB06774.1 N