OLONG_017894 (Oryza longistaminata)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF10545 (MADF_DNA_bdg) IPR006578 OLONG_017894 T249553_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.913 0.791
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.913 0.791
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.823 0.687
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OLONG_017894-R1 MADF 1 70
OLONG_017894-R1 MADF 265 334

Links

Other MADF family TFs
Other Oryza longistaminata TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
UM03525 Ustilago maydis UM03525 I
PaG_03936 Pseudozyma aphidis PaG_03936 N
PAN0_009c3772 Pseudozyma antarctica PAN0_009c3772 N
PHSY_001337 Pseudozyma hubeiensis PHSY_001337 N
sr14518 Sporisorium reilianum sr14518 N
UHOR_05421 Ustilago hordei UHOR_05421 N