CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OPUNC04G17930 *(Oryza punctata)* MADF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF10545 (MADF_DNA_bdg)	IPR006578	OPUNC04G17930	T249583_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
AT-GTL1 M06968_2.00	Arabidopsis thaliana	RHRGTAAAWW	WWTTTACYDY	Dap-seq OMalley et al.(2016) GTL1_col_a	0.920	0.787
AT-GTL1 M06969_2.00	Arabidopsis thaliana	RHRGTAAAWW	WWTTTACYDY	Dap-seq OMalley et al.(2016) GTL1_colamp_a	0.920	0.787
For this family, TFs with SR scores > 0.812* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OPUNC04G17930.1	MADF	110	181	SEMDATFRDATLKGPLWEEVSRKLAELGYKRSAKKCKEKFENVHKYYKRTKEGRAGRQDGKSYRFFTELEAL
OPUNC04G17930.1	MADF	499	568	LDMRYQETGPKGPLWEEISSGMQRLGYNRSSKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDA

Links
Other MADF family TFs
Other *Oryza punctata* TFs