Cucsa.378670 (Cucumis sativus)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Cucsa.378670 T250490_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G10030
M01258_2.00 		Arabidopsis thaliana
NRMCGTTAWNN
NNWTAACGKYN		 PBM
Lambert et al.(2019)
pTH11538 		0.958 0.840
AT3G10030
M06971_2.00 		Arabidopsis thaliana
HRHCKCCGTTANND
HNNTAACGGMGDYD		 Dap-seq
OMalley et al.(2016)
AT3G10030_col_a 		0.958 0.840
AT3G10030
M06972_2.00 		Arabidopsis thaliana
HWRHMKCCGTTAAHD
HDTTAACGGMKDYWD		 Dap-seq
OMalley et al.(2016)
AT3G10030_colamp_a 		0.958 0.840
PK04914.1
M01262_2.00 		Cannabis sativa
DCCGTYAN
NTRACGGH		 PBM
Lambert et al.(2019)
pTH10098 		0.954 0.813
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.378670.1 MADF 162 244
Cucsa.378670.2 MADF 162 244
Cucsa.378670.3 MADF 162 244

Links

Other MADF family TFs
Other Cucumis sativus TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M404DRAFT_994800 Pisolithus tinctorius M404DRAFT_994800 N
fgenesh2_pg.C_scaffold_4000190 Heterobasidion annosum fgenesh2_pg.C_scaffold_4000190 N
fgenesh1_pg.C_scaffold_4000544 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_4000544 N
SERLA73DRAFT_72210 Serpula lacrymans SERLA73DRAFT_72210 N
SCHCODRAFT_106746 Schizophyllum commune SCHCODRAFT_106746 N
PLEOSDRAFT_1098618 Pleurotus ostreatus PLEOSDRAFT_1098618 N
PISMIDRAFT_8428 Pisolithus microcarpus PISMIDRAFT_8428 N
PILCRDRAFT_820042 Piloderma croceum PILCRDRAFT_820042 N
PHLGIDRAFT_100624 Phlebiopsis gigantea PHLGIDRAFT_100624 N
PHACADRAFT_208262 Phanerochaete carnosa PHACADRAFT_208262 N
PAXRUDRAFT_826354 Paxillus rubicundulus PAXRUDRAFT_826354 N
MPER_03826 Moniliophthora perniciosa MPER_03826 N
Moror_2913 Moniliophthora roreri Moror_2913 N
M413DRAFT_445274 Hebeloma cylindrosporum M413DRAFT_445274 N
AGABI2DRAFT_209430 Agaricus bisporus AGABI2DRAFT_209430 N
JAAARDRAFT_207695 Jaapia argillacea JAAARDRAFT_207695 N
HYDPIDRAFT_111320 Hydnomerulius pinastri HYDPIDRAFT_111320 N
HETIRDRAFT_314002 Heterobasidion irregulare HETIRDRAFT_314002 N
GLOTRDRAFT_118184 Gloeophyllum trabeum GLOTRDRAFT_118184 N
GALMADRAFT_245970 Galerina marginata GALMADRAFT_245970 N
FOMPIDRAFT_1029514 Fomitopsis pinicola FOMPIDRAFT_1029514 N
FIBRA_07699 Fibroporia radiculosa FIBRA_07699 N
DICSQDRAFT_183662 Dichomitus squalens DICSQDRAFT_183662 N
CY34DRAFT_71692 Suillus luteus CY34DRAFT_71692 N
CERSUDRAFT_137226 Ceriporiopsis subvermispora CERSUDRAFT_137226 N
CC1G_11281 Coprinopsis cinerea CC1G_11281 N
BN946_scf184962.g68 Trametes cinnabarina BN946_scf184962.g68 N