Gorai.003G072300 (Gossypium raimondii)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 Gorai.003G072300 T250704_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.898 0.813
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.898 0.813
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G072300.1 MADF 110 179
Gorai.003G072300.1 MADF 506 575
Gorai.003G072300.2 MADF 110 179
Gorai.003G072300.2 MADF 506 575
Gorai.003G072300.3 MADF 110 179
Gorai.003G072300.3 MADF 506 575

Links

Other MADF family TFs
Other Gossypium raimondii TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM02G06290 Oryza glumaepatula OGLUM02G06290 N
SapurV1A.1771s0010 Salix purpurea SapurV1A.1771s0010 N