MDP0000451107 (Malus domestica)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 MDP0000451107 T250778_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.867 0.601
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.867 0.601
AT1G76880
M06970_2.00 		Arabidopsis thaliana
RHRGTAAAAWNDDDWW
WWHHHNWTTTTACYDY		 Dap-seq
OMalley et al.(2016)
AT1G76880_col_a 		0.829 0.609
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000451107 MADF 156 226
MDP0000451107 MADF 547 620

Links

Other MADF family TFs
Other Malus domestica TFs

193 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.867
AT1G76880 Arabidopsis thaliana AT1G76880 D 0.829
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.854
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.894
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.869
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.902
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.891
Bo2g091240 Brassica oleracea Bo2g091240 I 0.909
Bo6g049430 Brassica oleracea Bo6g049430 I 0.872
Bo6g083690 Brassica oleracea Bo6g083690 I 0.943
Bo6g120870 Brassica oleracea Bo6g120870 I 0.937
Bo8g027460 Brassica oleracea Bo8g027460 I 0.906
Bra003702 Brassica rapa Bra003702 I 0.873
Bra003703 Brassica rapa Bra003703 I 0.943
Bra008285 Brassica rapa Bra008285 I 0.936
Bra015716 Brassica rapa Bra015716 I 0.937
Bra036731 Brassica rapa Bra036731 I 0.906
Bra040010 Brassica rapa Bra040010 I 0.872
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I 0.822
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.874
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.902
F775_26337 Aegilops tauschii F775_26337 I 0.905
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.867
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.952
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.939
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.951
GLYMA16G28250 Glycine max GLYMA16G28250 I 0.949
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.951
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.883
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.852
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.869
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.890
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.883
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I 0.817
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.820
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.897
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.826
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.863
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.869
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.887
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.900
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.902
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.863
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.868
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.934
MTR_1g098900 Medicago truncatula MTR_1g098900 I 0.938
MTR_6g035370 Medicago truncatula MTR_6g035370 I 0.945
OB02G33250 Oryza brachyantha OB02G33250 I 0.874
OB04G27270 Oryza brachyantha OB04G27270 I 0.906
OBART02G25970 Oryza barthii OBART02G25970 I 0.879
OBART04G20290 Oryza barthii OBART04G20290 I 0.902
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.869
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.876
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.902
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.891
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.910
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.876
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.891
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.876
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.902
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.869
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.891
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.856
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.902
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.902
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.879
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.876
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.869
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.876
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.902
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.891
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.925
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I 0.928
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.882
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.941
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.933
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.935
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.940
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.880
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.913
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.882
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.962
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.917
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.893
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.855
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.883
scaffold_202643.1 Arabidopsis lyrata scaffold_202643.1 I 0.943
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.842
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.842
Si012121m.g Setaria italica Si012121m.g I 0.893
Si016578m.g Setaria italica Si016578m.g I 0.855
Si034382m.g Setaria italica Si034382m.g I 0.882
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.925
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.948
TCM_001348 Theobroma cacao TCM_001348 I 0.934
TCM_015563 Theobroma cacao TCM_015563 I 0.896
TCM_035565 Theobroma cacao TCM_035565 I 0.951
TCM_035571 Theobroma cacao TCM_035571 I 0.918
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.886
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.894
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.905
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.886
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.895
VIT_04s0044g00510 Vitis vinifera VIT_04s0044g00510 I 0.917
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.957
Ca_04385 Cicer arietinum Ca_04385 I 0.931
Ca_04386 Cicer arietinum Ca_04386 I 0.935
Ca_25135 Cicer arietinum Ca_25135 I 0.946
Cla001992 Citrullus lanatus Cla001992 I 0.941
Cla005046 Citrullus lanatus Cla005046 I 0.884
Cla007910 Citrullus lanatus Cla007910 I 0.887
Pm001889 Prunus mume Pm001889 I 0.822
Pm022570 Prunus mume Pm022570 I 0.920
Pm022572 Prunus mume Pm022572 I 0.962
Pm024289 Prunus mume Pm024289 I 0.882
29576.m000223 Ricinus communis 29576.m000223 I 0.928
30068.m002635 Ricinus communis 30068.m002635 I 0.886
30206.m000769 Ricinus communis 30206.m000769 I 0.935
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.941
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.953
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.942
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.896
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.896
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.896
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.824
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.889
Cucsa.204000 Cucumis sativus Cucsa.204000 I 0.941
Cucsa.250070 Cucumis sativus Cucsa.250070 I 0.893
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.873
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.873
mgf004276m Mimulus guttatus mgf004276m I 0.898
mgf021983m Mimulus guttatus mgf021983m I 0.911
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.893
Bostr.20129s0126 Boechera stricta Bostr.20129s0126 I 0.943
Bostr.3359s0047 Boechera stricta Bostr.3359s0047 I 0.911
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.925
Cagra.20992s0002 Capsella grandiflora Cagra.20992s0002 I 0.943
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.881
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.871
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.925
Carubv10020016m.g Capsella rubella Carubv10020016m.g I 0.943
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.930
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.936
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.909
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.914
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I 0.950
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.929
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.900
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.891
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.917
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.960
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.942
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.904
Gorai.008G099700 Gossypium raimondii Gorai.008G099700 I 0.931
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.890
Gorai.009G253700 Gossypium raimondii Gorai.009G253700 I 0.921
Gorai.009G253900 Gossypium raimondii Gorai.009G253900 I 0.921
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.920
MDP0000156139 Malus domestica MDP0000156139 I 0.967
MDP0000451038 Malus domestica MDP0000451038 I 0.880
MDP0000701272 Malus domestica MDP0000701272 I 0.896
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.909
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.930
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.936
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.914
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.859
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.893
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.869
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.840
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.866
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.937
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I 0.916
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I 0.928
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.882
SapurV1A.0625s0070 Salix purpurea SapurV1A.0625s0070 I 0.927
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.929
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.902
SapurV1A.5612s0010 Salix purpurea SapurV1A.5612s0010 I 0.927
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.871
Thhalv10018297m.g Eutrema salsugineum Thhalv10018297m.g I 0.943
PK24122.1 Cannabis sativa PK24122.1 I 0.936
PK26613.1 Cannabis sativa PK26613.1 I 0.878
F775_24861 Aegilops tauschii F775_24861 N 0.851
GLYMA04G39400 Glycine max GLYMA04G39400 N 0.866
GLYMA06G15500 Glycine max GLYMA06G15500 N 0.879
GLYMA09G19750 Glycine max GLYMA09G19750 N 0.865
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N 0.826
Solyc11g005380.1 Solanum lycopersicum Solyc11g005380.1 N 0.826
mgf015314m Mimulus guttatus mgf015314m N 0.838
mgf018892m Mimulus guttatus mgf018892m N 0.897
gene18585-v1.0-hybrid Fragaria vesca gene18585-v1.0-hybrid N 0.880
Lus10020873.g Linum usitatissimum Lus10020873.g N 0.866
Lus10033504.g Linum usitatissimum Lus10033504.g N 0.872