orange1.1g048697m.g (Citrus sinensis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 orange1.1g048697m.g T258843_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g048697m MADS box 10 54

Links

Other MADS box family TFs
Other Citrus sinensis TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ABF2 Arabidopsis thaliana AT1G45249 D
ABF1 Arabidopsis thaliana AT1G49720 D
ABF4 Arabidopsis thaliana AT3G19290 D
ABF3 Arabidopsis thaliana AT4G34000 D
PK18009.1 Cannabis sativa PK18009.1 D
AMTR_s00132p00065700 Amborella trichopoda AMTR_s00132p00065700 I
BGIOSGA005551 Oryza indica BGIOSGA005551 I
BGIOSGA028831 Oryza indica BGIOSGA028831 I
BGIOSGA030899 Oryza indica BGIOSGA030899 I
Bo1g007700 Brassica oleracea Bo1g007700 I
Bo3g073080 Brassica oleracea Bo3g073080 I
Bo5g115300 Brassica oleracea Bo5g115300 I
Bo6g006970 Brassica oleracea Bo6g006970 I
Bo7g116570 Brassica oleracea Bo7g116570 I
Bra022409 Brassica rapa Bra022409 I
Bra037533 Brassica rapa Bra037533 I
Bra040260 Brassica rapa Bra040260 I
BRADI3G38200 Brachypodium distachyon BRADI3G38200 I
ABF2 Arabidopsis lyrata fgenesh2_kg.1__3804__AT1G45249.1 I
ABF1 Arabidopsis lyrata fgenesh2_kg.1__4055__AT1G49720.1 I
ABF4 Arabidopsis lyrata fgenesh2_kg.3__2145__AT3G19290.1 I
ABF3 Arabidopsis lyrata fgenesh2_kg.7__705__AT4G34000.1 I
GLYMA04G04170 Glycine max GLYMA04G04170 I
GLYMA06G04353 Glycine max GLYMA06G04353 I
GRMZM2G002075 Zea mays GRMZM2G002075 I
GRMZM2G033413 Zea mays GRMZM2G033413 I
GRMZM2G157722 Zea mays GRMZM2G157722 I
GRMZM2G478417 Zea mays GRMZM2G478417 I
GRMZM5G858197 Zea mays GRMZM5G858197 I
GSMUA_Achr3G07000_001 Musa acuminata GSMUA_Achr3G07000_001 I
GSMUA_Achr5G05690_001 Musa acuminata GSMUA_Achr5G05690_001 I
GSMUA_Achr5G24570_001 Musa acuminata GSMUA_Achr5G24570_001 I
GSMUA_Achr6G04270_001 Musa acuminata GSMUA_Achr6G04270_001 I
GSMUA_Achr6G30550_001 Musa acuminata GSMUA_Achr6G30550_001 I
GSMUA_Achr9G27130_001 Musa acuminata GSMUA_Achr9G27130_001 I
LPERR02G27610 Leersia perrieri LPERR02G27610 I
LPERR08G14740 Leersia perrieri LPERR08G14740 I
LPERR09G09170 Leersia perrieri LPERR09G09170 I
MLOC_66546 Hordeum vulgare MLOC_66546 I
MTR_3g101780 Medicago truncatula MTR_3g101780 I
OB02G40680 Oryza brachyantha OB02G40680 I
OB08G24950 Oryza brachyantha OB08G24950 I
OB09G19140 Oryza brachyantha OB09G19140 I
OBART02G33770 Oryza barthii OBART02G33770 I
OGLUM02G34210 Oryza glumaepatula OGLUM02G34210 I
OGLUM09G13130 Oryza glumaepatula OGLUM09G13130 I
OLONG_001053 Oryza longistaminata OLONG_001053 I
OMERI02G32150 Oryza meridionalis OMERI02G32150 I
OMERI09G10130 Oryza meridionalis OMERI09G10130 I
ONIVA02G33490 Oryza nivara ONIVA02G33490 I
OPUNC08G15700 Oryza punctata OPUNC08G15700 I
OPUNC09G11090 Oryza punctata OPUNC09G11090 I
ORGLA02G0292000 Oryza glaberrima ORGLA02G0292000 I
ORGLA08G0211300 Oryza glaberrima ORGLA08G0211300 I
ORGLA09G0097200 Oryza glaberrima ORGLA09G0097200 I
ORUFI02G35260 Oryza rufipogon ORUFI02G35260 I
ORUFI08G19970 Oryza rufipogon ORUFI08G19970 I
ORUFI12G20810 Oryza rufipogon ORUFI12G20810 I
BZIP23 Oryza sativa OS02G0766700 I
BZIP46 Oryza sativa OS06G0211200 I
OS09G0456200 Oryza sativa OS09G0456200 I
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I
PGSC0003DMG400008011 Solanum tuberosum PGSC0003DMG400008011 I
PGSC0003DMG400022931 Solanum tuberosum PGSC0003DMG400022931 I
PGSC0003DMG400025889 Solanum tuberosum PGSC0003DMG400025889 I
POPTR_0002s12710 Populus trichocarpa POPTR_0002s12710 I
POPTR_0009s10400 Populus trichocarpa POPTR_0009s10400 I
POPTR_0014s02810 Populus trichocarpa POPTR_0014s02810 I
PRUPE_ppa006752mg Prunus persica PRUPE_ppa006752mg I
Sb03g040970 Sorghum bicolor Sb03g040970 I
Sb04g034190 Sorghum bicolor Sb04g034190 I
Sb07g022965 Sorghum bicolor Sb07g022965 I
Sb10g007090 Sorghum bicolor Sb10g007090 I
Si003247m.g Setaria italica Si003247m.g I
Si006889m.g Setaria italica Si006889m.g I
Si013904m.g Setaria italica Si013904m.g I
Si017618m.g Setaria italica Si017618m.g I
Si030114m.g Setaria italica Si030114m.g I
Solyc01g108080.2 Solanum lycopersicum Solyc01g108080.2 I
Solyc04g078840.2 Solanum lycopersicum Solyc04g078840.2 I
Solyc10g050210.1 Solanum lycopersicum Solyc10g050210.1 I
Solyc11g044560.1 Solanum lycopersicum Solyc11g044560.1 I
TCM_007074 Theobroma cacao TCM_007074 I
VIT_03s0063g00310 Vitis vinifera VIT_03s0063g00310 I
ABF2 Vitis vinifera VIT_18s0001g10450 I
Ca_01548 Cicer arietinum Ca_01548 I
Cla016272 Citrullus lanatus Cla016272 I
Pm021430 Prunus mume Pm021430 I
29625.m000702 Ricinus communis 29625.m000702 I
29801.m003176 Ricinus communis 29801.m003176 I
30170.m013868 Ricinus communis 30170.m013868 I
cassava12275.valid.m1 Manihot esculenta cassava12275.valid.m1 I
cassava42669.valid.m1 Manihot esculenta cassava42669.valid.m1 I
cassava42743.valid.m1 Manihot esculenta cassava42743.valid.m1 I
cassava42744.valid.m1 Manihot esculenta cassava42744.valid.m1 I
cassava42745.valid.m1 Manihot esculenta cassava42745.valid.m1 I
Cucsa.219780 Cucumis sativus Cucsa.219780 I
mgf002047m Mimulus guttatus mgf002047m I
mgf007524m Mimulus guttatus mgf007524m I
mgf014602m Mimulus guttatus mgf014602m I
mgf020824m Mimulus guttatus mgf020824m I
Bostr.19424s0732 Boechera stricta Bostr.19424s0732 I
Bostr.7867s1253 Boechera stricta Bostr.7867s1253 I
Cagra.1305s0026 Capsella grandiflora Cagra.1305s0026 I
Cagra.2481s0016 Capsella grandiflora Cagra.2481s0016 I
Cagra.4978s0002 Capsella grandiflora Cagra.4978s0002 I
Carubv10006251m.g Capsella rubella Carubv10006251m.g I
Carubv10013729m.g Capsella rubella Carubv10013729m.g I
Ciclev10001159m.g Citrus clementina Ciclev10001159m.g I
Ciclev10028435m.g Citrus clementina Ciclev10028435m.g I
Eucgr.F02337 Eucalyptus grandis Eucgr.F02337 I
Eucgr.G01436 Eucalyptus grandis Eucgr.G01436 I
Eucgr.I01145 Eucalyptus grandis Eucgr.I01145 I
evm.TU.supercontig_49.26 Carica papaya evm.TU.supercontig_49.26 I
evm.TU.supercontig_62.4 Carica papaya evm.TU.supercontig_62.4 I
gene09110-v1.0-hybrid Fragaria vesca gene09110-v1.0-hybrid I
gene28250-v1.0-hybrid Fragaria vesca gene28250-v1.0-hybrid I
Gorai.005G102300 Gossypium raimondii Gorai.005G102300 I
Gorai.005G237400 Gossypium raimondii Gorai.005G237400 I
Gorai.008G024700 Gossypium raimondii Gorai.008G024700 I
Gorai.013G044500 Gossypium raimondii Gorai.013G044500 I
Lus10002399.g Linum usitatissimum Lus10002399.g I
Lus10014066.g Linum usitatissimum Lus10014066.g I
Lus10014194.g Linum usitatissimum Lus10014194.g I
Lus10022720.g Linum usitatissimum Lus10022720.g I
Lus10027897.g Linum usitatissimum Lus10027897.g I
MDP0000248567 Malus domestica MDP0000248567 I
MDP0000296303 Malus domestica MDP0000296303 I
orange1.1g013197m.g Citrus sinensis orange1.1g013197m.g I
orange1.1g021624m.g Citrus sinensis orange1.1g021624m.g I
orange1.1g025340m.g Citrus sinensis orange1.1g025340m.g I
Pavir.Ba02029 Panicum virgatum Pavir.Ba02029 I
Pavir.Da01931 Panicum virgatum Pavir.Da01931 I
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I
Pavir.Fa00674 Panicum virgatum Pavir.Fa00674 I
Pavir.Fb01750 Panicum virgatum Pavir.Fb01750 I
Pavir.J05659 Panicum virgatum Pavir.J05659 I
Pavir.J31353 Panicum virgatum Pavir.J31353 I
SapurV1A.0167s0060 Salix purpurea SapurV1A.0167s0060 I
SapurV1A.0643s0160 Salix purpurea SapurV1A.0643s0160 I
SapurV1A.0878s0160 Salix purpurea SapurV1A.0878s0160 I
SapurV1A.3185s0030 Salix purpurea SapurV1A.3185s0030 I
Thhalv10011493m.g Eutrema salsugineum Thhalv10011493m.g I
Thhalv10012271m.g Eutrema salsugineum Thhalv10012271m.g I
Thhalv10020772m.g Eutrema salsugineum Thhalv10020772m.g I
Thhalv10025203m.g Eutrema salsugineum Thhalv10025203m.g I
PK02169.1 Cannabis sativa PK02169.1 I
BRADI3G57960 Brachypodium distachyon BRADI3G57960 N
MLOC_20326 Hordeum vulgare MLOC_20326 N
MLOC_53580 Hordeum vulgare MLOC_53580 N
Traes_6AL_E8CD2C02B Triticum aestivum Traes_6AL_E8CD2C02B N
Traes_6DL_F7015CE89 Triticum aestivum Traes_6DL_F7015CE89 N
Traes_7DS_C6A3C10A6 Triticum aestivum Traes_7DS_C6A3C10A6 N
TRIUR3_23754 Triticum urartu TRIUR3_23754 N