CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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29703.m001533
(
Ricinus communis
)
MBD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01429 (MBD)
IPR001739
29703.m001533
T261323_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
29703.m001533
MBD
62
135
WVIDKPGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKYKGVSIEDFNFTSPKVMEE
Links
Other
MBD
family TFs
Other
Ricinus communis
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA03G19010
Oryza nivara
ONIVA03G19010
N
TRIUR3_32728
Triticum urartu
TRIUR3_32728
N
Traes_4DL_54206FBF3
Triticum aestivum
Traes_4DL_54206FBF3
N
Traes_4DL_54206FBF31
Triticum aestivum
Traes_4DL_54206FBF31
N
Traes_4BS_AB9EE132F
Triticum aestivum
Traes_4BS_AB9EE132F
N
Traes_4BS_4D4146347
Triticum aestivum
Traes_4BS_4D4146347
N
Traes_4BS_1729D563E
Triticum aestivum
Traes_4BS_1729D563E
N
Traes_1AS_74E6A4EC7
Triticum aestivum
Traes_1AS_74E6A4EC7
N
Si036723m.g
Setaria italica
Si036723m.g
N
ORUFI03G18850
Oryza rufipogon
ORUFI03G18850
N
OPUNC03G17310
Oryza punctata
OPUNC03G17310
N
BGIOSGA012660
Oryza indica
BGIOSGA012660
N
OMERI03G16300
Oryza meridionalis
OMERI03G16300
N
OGLUM03G18670
Oryza glumaepatula
OGLUM03G18670
N
OBART03G18090
Oryza barthii
OBART03G18090
N
MLOC_6239
Hordeum vulgare
MLOC_6239
N
LPERR03G15750
Leersia perrieri
LPERR03G15750
N
GRMZM2G168665
Zea mays
GRMZM2G168665
N
GRMZM2G157716
Zea mays
GRMZM2G157716
N
F775_14666
Aegilops tauschii
F775_14666
N
BRADI1G61810
Brachypodium distachyon
BRADI1G61810
N