CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
27613.m000644
(
Ricinus communis
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02536 (mTERF)
IPR003690
27613.m000644
T264295_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
27613.m000644
mTERF
190
476
IDLDNRWLPLLDYLCTFGLKESDFIQMYERHMPSLQINVSSAQERLEYLLSVGVKHRDIRRILLRQPQILEYTVDNNLKSHVAFLSSLGIPNSRIGQIIAVTPSLFSYSVQNSLKPTVRYLVEELGINEKNIGKVVQLSPQILVQRIDISWNTRYIFLSKELGASKESVVKMVTKHPQLLHYSIDDGFVPRINFLRSIGMRNSDILKVLTSLTQVLSLSLEDNLKPKYKYLINELRNEVQSLTKYPMYLSLSLDQRIRPRHKFLVALKKAPKGPFPLSSFVPTDECF
Links
Other
mTERF
family TFs
Other
Ricinus communis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava31397.valid.m1
Manihot esculenta
cassava31397.valid.m1
N
0.917
PK04020.1
Cannabis sativa
PK04020.1
N
0.792
Thhalv10013311m.g
Eutrema salsugineum
Thhalv10013311m.g
N
0.769
SapurV1A.0031s0210
Salix purpurea
SapurV1A.0031s0210
N
0.798
Gorai.013G155100
Gossypium raimondii
Gorai.013G155100
N
0.859
evm.TU.supercontig_12.192
Carica papaya
evm.TU.supercontig_12.192
N
0.859
Eucgr.F03524
Eucalyptus grandis
Eucgr.F03524
N
0.812
Carubv10026264m.g
Capsella rubella
Carubv10026264m.g
N
0.824
Cagra.6942s0013
Capsella grandiflora
Cagra.6942s0013
N
0.782
Bostr.26833s0699
Boechera stricta
Bostr.26833s0699
N
0.780
mgf013248m
Mimulus guttatus
mgf013248m
N
0.796
MTERF9
Arabidopsis thaliana
AT5G55580
N
0.773
Ca_09700
Cicer arietinum
Ca_09700
N
0.776
TCM_030731
Theobroma cacao
TCM_030731
N
0.861
POPTR_0001s37280
Populus trichocarpa
POPTR_0001s37280
N
0.854
PGSC0003DMG401029813
Solanum tuberosum
PGSC0003DMG401029813
N
0.754
MTR_5g094610
Medicago truncatula
MTR_5g094610
N
0.745
GLYMA14G01940
Glycine max
GLYMA14G01940
N
0.815
GLYMA02G46750
Glycine max
GLYMA02G46750
N
0.815
fgenesh2_kg.8__1461__AT5G55580.1
Arabidopsis lyrata
fgenesh2_kg.8__1461__AT5G55580.1
N
0.776
Bra028970
Brassica rapa
Bra028970
N
0.821
Bo3g021450
Brassica oleracea
Bo3g021450
N
0.771