Bo1g155040 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo1g155040 T267119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.909 0.989
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.909 0.989
MYB106
M11040_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT3G01140_01 		0.776 0.785
AtMYB93
M07020_2.00 		Arabidopsis thaliana
HDNYYYAMCWAMYHHHHHHHH
DDDDDDDDRKTWGKTRRRNHD		 Dap-seq
OMalley et al.(2016)
MYB93_col_a 		0.775 0.828
AtMYB93
M07021_2.00 		Arabidopsis thaliana
NNHNBYYYAMCWAMY
RKTWGKTRRRVNDNN		 Dap-seq
OMalley et al.(2016)
MYB93_colamp_a 		0.775 0.828
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.757 0.785
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.757 0.785
AtMYB17
M07099_2.00 		Arabidopsis thaliana
YYYACCWACCWHHHH
DDDDWGGTWGGTRRR		 Dap-seq
OMalley et al.(2016)
MYB17_colamp_a 		0.735 0.731
MYB58
M07005_2.00 		Arabidopsis thaliana
NNYYYACCWAMCHHH
DDDGKTWGGTRRRNN		 Dap-seq
OMalley et al.(2016)
MYB58_col_a 		0.703 0.710
MYB58
M07006_2.00 		Arabidopsis thaliana
HNNYHYACCWAMCHHHNNNNH
DNNNNDDDGKTWGGTRDRNND		 Dap-seq
OMalley et al.(2016)
MYB58_colamp_a 		0.703 0.710
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.693 0.796
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.693 0.774
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.693 0.774
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.678 0.742
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.678 0.742
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.666 0.785
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.666 0.785
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g155040.1 Myb 14 61
Bo1g155040.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

900 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TWIST1 Homo sapiens ENSG00000122691 D
Twist2 Mus musculus ENSMUSG00000007805 D
Twist1 Mus musculus ENSMUSG00000035799 D
twi Drosophila melanogaster FBgn0003900 D
CpipJ_CPIJ012827 Culex pipiens CpipJ_CPIJ012827 I
CpipJ_CPIJ012828 Culex pipiens CpipJ_CPIJ012828 I
AAEL002902 Aedes aegypti AAEL002902 I
ACEP23430 Atta cephalotes ACEP23430 I
ACYPI001448 Acyrthosiphon pisum ACYPI001448 I
AGAP011985 Anopheles gambiae AGAP011985 I
CapteG111042 Capitella teleta CapteG111042 I
CapteG154829 Capitella teleta CapteG154829 I
CGI_10006631 Crassostrea gigas CGI_10006631 I
CGI_10013641 Crassostrea gigas CGI_10013641 I
CPIJ012827 Culex quinquefasciatus CPIJ012827 I
CPIJ012828 Culex quinquefasciatus CPIJ012828 I
DAPPUDRAFT_320202 Daphnia pulex DAPPUDRAFT_320202 I
EFV58362 Trichinella spiralis EFV58362 I
ENSACAG00000009715 Anolis carolinensis ENSACAG00000009715 I
twist1 Anolis carolinensis ENSACAG00000011825 I
ENSACAG00000015086 Anolis carolinensis ENSACAG00000015086 I
ENSAMEG00000008556 Ailuropoda melanoleuca ENSAMEG00000008556 I
ENSAMEG00000020165 Ailuropoda melanoleuca ENSAMEG00000020165 I
ENSAMXG00000024993 Astyanax mexicanus ENSAMXG00000024993 I
ENSAMXG00000025039 Astyanax mexicanus ENSAMXG00000025039 I
ENSAMXG00000025095 Astyanax mexicanus ENSAMXG00000025095 I
ENSAMXG00000025610 Astyanax mexicanus ENSAMXG00000025610 I
ENSAMXG00000025657 Astyanax mexicanus ENSAMXG00000025657 I
ENSAPLG00000000878 Anas platyrhynchos ENSAPLG00000000878 I
ENSAPLG00000007177 Anas platyrhynchos ENSAPLG00000007177 I
TWIST2 Bos taurus ENSBTAG00000021444 I
TWIST1 Bos taurus ENSBTAG00000046922 I
TWIST2 Canis familiaris ENSCAFG00000012469 I
TWIST2 Callithrix jacchus ENSCJAG00000023006 I
TWIST2 Cavia porcellus ENSCPOG00000025980 I
ENSCSAG00000018801 Chlorocebus sabaeus ENSCSAG00000018801 I
ENSCSAG00000019610 Chlorocebus sabaeus ENSCSAG00000019610 I
twist3 Danio rerio ENSDARG00000019646 I
twist1a Danio rerio ENSDARG00000030402 I
twist1b Danio rerio ENSDARG00000076010 I
twist2 Danio rerio ENSDARG00000078266 I
TWIST2 Dasypus novemcinctus ENSDNOG00000002434 I
TWIST1 Dasypus novemcinctus ENSDNOG00000037354 I
ENSDORG00000012866 Dipodomys ordii ENSDORG00000012866 I
TWIST1 Erinaceus europaeus ENSEEUG00000015333 I
TWIST2 Echinops telfairi ENSETEG00000009809 I
ENSETEG00000013115 Echinops telfairi ENSETEG00000013115 I
ENSFALG00000009781 Ficedula albicollis ENSFALG00000009781 I
ENSFALG00000014990 Ficedula albicollis ENSFALG00000014990 I
ENSFALG00000015081 Ficedula albicollis ENSFALG00000015081 I
TWIST2 Homo sapiens ENSG00000233608 I
twist2 Gasterosteus aculeatus ENSGACG00000002227 I
twist3b Gasterosteus aculeatus ENSGACG00000004773 I
TWIST1 Gasterosteus aculeatus ENSGACG00000006420 I
twist3 Gasterosteus aculeatus ENSGACG00000007963 I
twist1b Gasterosteus aculeatus ENSGACG00000008070 I
ENSGALG00000004274 Gallus gallus ENSGALG00000004274 I
ENSGALG00000026059 Gallus gallus ENSGALG00000026059 I
ENSGMOG00000002790 Gadus morhua ENSGMOG00000002790 I
ENSGMOG00000003155 Gadus morhua ENSGMOG00000003155 I
ENSLACG00000012096 Latimeria chalumnae ENSLACG00000012096 I
ENSLACG00000013366 Latimeria chalumnae ENSLACG00000013366 I
TWIST2 Loxodonta africana ENSLAFG00000032174 I
ENSLOCG00000017835 Lepisosteus oculatus ENSLOCG00000017835 I
ENSLOCG00000018198 Lepisosteus oculatus ENSLOCG00000018198 I
ENSLOCG00000018350 Lepisosteus oculatus ENSLOCG00000018350 I
ENSMEUG00000013853 Macropus eugenii ENSMEUG00000013853 I
ENSMGAG00000002218 Meleagris gallopavo ENSMGAG00000002218 I
TWIST1 Myotis lucifugus ENSMLUG00000007047 I
TWIST2 Myotis lucifugus ENSMLUG00000023316 I
TWIST1 Macaca mulatta ENSMMUG00000011173 I
TWIST2 Macaca mulatta ENSMMUG00000021909 I
ENSMODG00000001412 Monodelphis domestica ENSMODG00000001412 I
TWIST1 Monodelphis domestica ENSMODG00000023924 I
ENSMPUG00000019429 Mustela putorius furo ENSMPUG00000019429 I
ENSNLEG00000011342 Nomascus leucogenys ENSNLEG00000011342 I
ENSNLEG00000019264 Nomascus leucogenys ENSNLEG00000019264 I
TWIST1 Ornithorhynchus anatinus ENSOANG00000009614 I
ENSOANG00000012950 Ornithorhynchus anatinus ENSOANG00000012950 I
ENSOARG00000000265 Ovis aries ENSOARG00000000265 I
ENSOARG00000009754 Ovis aries ENSOARG00000009754 I
TWIST2 Oryctolagus cuniculus ENSOCUG00000004073 I
TWIST2 Otolemur garnettii ENSOGAG00000029007 I
ENSONIG00000020502 Oreochromis niloticus ENSONIG00000020502 I
ENSONIG00000020610 Oreochromis niloticus ENSONIG00000020610 I
ENSONIG00000021177 Oreochromis niloticus ENSONIG00000021177 I
ENSONIG00000021342 Oreochromis niloticus ENSONIG00000021342 I
TWIST2 Ochotona princeps ENSOPRG00000017069 I
TWIST1 Oryzias latipes ENSORLG00000004012 I
twist1 Oryzias latipes ENSORLG00000007251 I
twist3 Oryzias latipes ENSORLG00000016373 I
twist2 Oryzias latipes ENSORLG00000018096 I
ENSPANG00000001578 Papio anubis ENSPANG00000001578 I
ENSPFOG00000019887 Poecilia formosa ENSPFOG00000019887 I
ENSPFOG00000020053 Poecilia formosa ENSPFOG00000020053 I
ENSPFOG00000020314 Poecilia formosa ENSPFOG00000020314 I
ENSPFOG00000020501 Poecilia formosa ENSPFOG00000020501 I
ENSPMAG00000003993 Petromyzon marinus ENSPMAG00000003993 I
ENSPMAG00000010126 Petromyzon marinus ENSPMAG00000010126 I
ENSPPYG00000017754 Pongo abelii ENSPPYG00000017754 I
ENSPSIG00000012843 Pelodiscus sinensis ENSPSIG00000012843 I
ENSPTRG00000018960 Pan troglodytes ENSPTRG00000018960 I
TWIST2 Pan troglodytes ENSPTRG00000033910 I
TWIST1 Pteropus vampyrus ENSPVAG00000001710 I
Twist1 Rattus norvegicus ENSRNOG00000011101 I
Twist2 Rattus norvegicus ENSRNOG00000020355 I
ENSSHAG00000003328 Sarcophilus harrisii ENSSHAG00000003328 I
TWIST1 Sus scrofa ENSSSCG00000015370 I
TWIST2 Sus scrofa ENSSSCG00000016343 I
ENSSTOG00000004633 Ictidomys tridecemlineatus ENSSTOG00000004633 I
TWIST1 Taeniopygia guttata ENSTGUG00000002643 I
ENSTGUG00000003194 Taeniopygia guttata ENSTGUG00000003194 I
ENSTGUG00000003756 Taeniopygia guttata ENSTGUG00000003756 I
twist3 Tetraodon nigroviridis ENSTNIG00000000441 I
twist2 Tetraodon nigroviridis ENSTNIG00000001562 I
TWIST1 Tetraodon nigroviridis ENSTNIG00000001678 I
twist1b Tetraodon nigroviridis ENSTNIG00000018440 I
twist2 Takifugu rubripes ENSTRUG00000006090 I
twist3 Takifugu rubripes ENSTRUG00000011374 I
twist3 Takifugu rubripes ENSTRUG00000012607 I
twist1 Takifugu rubripes ENSTRUG00000015797 I
ENSXMAG00000019787 Xiphophorus maculatus ENSXMAG00000019787 I
ENSXMAG00000019956 Xiphophorus maculatus ENSXMAG00000019956 I
ENSXMAG00000019999 Xiphophorus maculatus ENSXMAG00000019999 I
ENSXMAG00000020062 Xiphophorus maculatus ENSXMAG00000020062 I
ENSXMAG00000020142 Xiphophorus maculatus ENSXMAG00000020142 I
twi Drosophila simulans FBgn0016355 I
twi Drosophila virilis FBgn0020065 I
twi Drosophila erecta FBgn0064598 I
twi Drosophila yakuba FBgn0084444 I
GF13559 Drosophila ananassae FBgn0090588 I
GH20971 Drosophila grimshawi FBgn0128433 I
GI21307 Drosophila mojavensis FBgn0144037 I
GL11229 Drosophila persimilis FBgn0148838 I
GM15978 Drosophila sechellia FBgn0170894 I
GK19547 Drosophila willistoni FBgn0221545 I
twi Drosophila pseudoobscura FBgn0243556 I
GB40416 Apis mellifera GB40416 I
ISCW009433 Ixodes scapularis ISCW009433 I
L798_05856 Zootermopsis nevadensis L798_05856 I
NEMVEDRAFT_v1g234699 Nematostella vectensis NEMVEDRAFT_v1g234699 I
NV10141 Nasonia vitripennis NV10141 I
PHUM396880 Pediculus humanus PHUM396880 I
RPRC000323 Rhodnius prolixus RPRC000323 I
SINV20920 Solenopsis invicta SINV20920 I
SPU_030059 Strongylocentrotus purpuratus SPU_030059 I
TC014598 Tribolium castaneum TC014598 I
YQE_04855 Dendroctonus ponderosae YQE_04855 I
Aan_R001044 Calypte anna Aan_R001044 I
Aan_R002857 Calypte anna Aan_R002857 I
Afo_R010658 Aptenodytes forsteri Afo_R010658 I
Alligator_sinensis_CCG002585.1 Alligator sinensis Alligator_sinensis_CCG002585.1 I
Alligator_sinensis_CCG008488.1 Alligator sinensis Alligator_sinensis_CCG008488.1 I
Brh_R012765 Buceros rhinoceros Brh_R012765 I
Cflo_04586--NP_001011637.1_APIME Camponotus floridanus Cflo_04586--NP_001011637.1_APIME I
Cmyd_10006750 Chelonia mydas Cmyd_10006750 I
ENSP00000405176-D1 Bos grunniens ENSP00000405176-D1 I
Gfo_R012065 Geospiza fortis Gfo_R012065 I
Gfo_R014393 Geospiza fortis Gfo_R014393 I
Hsal_01530--NP_001011637.1_APIME Harpegnathos saltator Hsal_01530--NP_001011637.1_APIME I
Myotis_brandtii_Twist1_10031742 Myotis brandtii Myotis_brandtii_Twist1_10031742 I
Ogr06591 Ophisaurus gracilis Ogr06591 I
Ogr11552 Ophisaurus gracilis Ogr11552 I
Ogr11553 Ophisaurus gracilis Ogr11553 I
Pvit_02271 Pogona vitticeps Pvit_02271 I
estExt_gwp.C_4170045 Branchiostoma floridae estExt_gwp.C_4170045 I
fgenesh2_pm.scaffold_217000008 Branchiostoma floridae fgenesh2_pm.scaffold_217000008 I
Ocbimv22015922m.g Octopus bimaculoides Ocbimv22015922m.g I
Sakowv30001350m.g Saccoglossus kowalevskii Sakowv30001350m.g I
CLEC011700 Cimex lectularius CLEC011700 I
LCUP006189 Lucilia cuprina LCUP006189 I
LDEC006528 Leptinotarsa decemlineata LDEC006528 I
twist1 Xenopus tropicalis XB-GENE-479802 I
twist2 Xenopus tropicalis XB-GENE-5878700 I
twist1.L Xenopus laevis XB-GENE-6255840 I
twist1.S Xenopus laevis XB-GENE-865309 I
AALB010655 Anopheles albimanus AALB010655 I
AARA000771 Anopheles arabiensis AARA000771 I
AATE005140 Anopheles atroparvus AATE005140 I
ACHR006076 Anopheles christyi ACHR006076 I
ACOM023427 Anopheles coluzzii ACOM023427 I
ACUA022223 Anopheles culicifacies ACUA022223 I
ADIR004364 Anopheles dirus ADIR004364 I
AFAF020800 Anopheles farauti AFAF020800 I
AFUN009694 Anopheles funestus AFUN009694 I
AMEC000330 Anopheles melas AMEC000330 I
AMEM016167 Anopheles merus AMEM016167 I
AMIN004405 Anopheles minimus AMIN004405 I
AQUA008654 Anopheles quadriannulatus AQUA008654 I
ASTEI05879 Anopheles stephensi ASTEI05879 I
BGLB003400 Biomphalaria glabrata BGLB003400 I
BGLB010605 Biomphalaria glabrata BGLB010605 I
MDOA005417 Musca domestica MDOA005417 I
D915_00417 Fasciola hepatica D915_00417 I
D917_00468 Trichinella nativa D917_00468 I
D918_07072 Trichuris suis D918_07072 I
ECANG7_02703 Echinococcus canadensis ECANG7_02703 I
PXEA_0000232401 Protopolystoma xenopodis PXEA_0000232401 I
SCUD_0002255501 Schistosoma curassoni SCUD_0002255501 I
TMUE_s0004013100 Trichuris muris TMUE_s0004013100 I
TRE_0001282801 Trichobilharzia regenti TRE_0001282801 I
TTAC_0000855201 Hydatigera taeniaeformis TTAC_0000855201 I
TTRE_0000397101 Trichuris trichiura TTRE_0000397101 I
PPAI007734 Phlebotomus papatasi PPAI007734 N