Bo2g167960 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo2g167960 T267195_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB44
M01082_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH7078 		0.891 0.968
MYB44
M07155_2.00 		Arabidopsis thaliana
HDTAACBGWHW
WDWCVGTTAHD		 Dap-seq
OMalley et al.(2016)
MYB44_colamp_a 		0.891 0.968
MYB44
M07156_2.00 		Arabidopsis thaliana
HAACBRWHWWAACBGHHWH
DWDDCVGTTWWDWYVGTTD		 Dap-seq
OMalley et al.(2016)
MYB44_col 		0.891 0.968
F3A4.140
M02299_2.00 		Arabidopsis thaliana
YAACBGYY
RRCVGTTR		 PBM
Weirauch et al.(2014)
pTH7112 		0.815 0.871
F3A4.140
M07095_2.00 		Arabidopsis thaliana
TAACBGYHWHNNHNN
NNDNNDWDRCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB77_col_a 		0.815 0.871
F3A4.140
M07096_2.00 		Arabidopsis thaliana
AACCGYAACCSTAWHWWAMV
BKTWWDWTASGGTTRCGGTT		 Dap-seq
OMalley et al.(2016)
MYB77_colamp_a 		0.815 0.871
F3A4.140
M02701_2.00 		Arabidopsis thaliana
SYAACYGYCVHBN
NVDBGRCRGTTRS		 SELEX
Mathelier et al.(2014)
MA0575.1 		0.815 0.871
F3A4.140
M11044_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATMYB77_01 		0.815 0.871
PK28565.1
M02357_2.00 		Cannabis sativa
TAACBGTY
RACVGTTA		 PBM
Weirauch et al.(2014)
pTH9653 		0.807 0.849
AtMYB70
M01071_2.00 		Arabidopsis thaliana
HAACBRHHN
NDDYVGTTD		 PBM
Sullivan et al.(2014)
pTH8588 		0.807 0.839
AtMYB70
M07048_2.00 		Arabidopsis thaliana
YAACBGWHWWAAMN
NKTTWWDWCVGTTR		 Dap-seq
OMalley et al.(2016)
MYB70_col_a 		0.807 0.839
MYB73
M07114_2.00 		Arabidopsis thaliana
TAACBGWHWHW
WDWDWCVGTTA		 Dap-seq
OMalley et al.(2016)
MYB73_col_a 		0.785 0.849
OS02G0187700
M02327_2.00 		Oryza sativa
NTAMCKGTHN
NDACMGKTAN		 PBM
Weirauch et al.(2014)
pTH8645 		0.684 0.774
PK07741.1
M01277_2.00 		Cannabis sativa
HAMCBRHHN
NDDYVGKTD		 PBM
Lambert et al.(2019)
pTH11469 		0.679 0.731
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g167960.1 Myb 6 52
Bo2g167960.1 Myb 58 103

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

318 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MSANTD3 Homo sapiens ENSG00000066697 D 0.000
ENSOARG00000007598 Ovis aries ENSOARG00000007598 I 0.000
MSANTD3 Ornithorhynchus anatinus ENSOANG00000002115 I 0.000
MSANTD3-TMEFF1 Oryctolagus cuniculus ENSOCUG00000006373 I 0.000
MSANTD3 Otolemur garnettii ENSOGAG00000024703 I 0.000
ENSPPYG00000019447 Pongo abelii ENSPPYG00000019447 I 0.000
MSANTD3 Pan troglodytes ENSPTRG00000038720 I 0.000
Msantd3 Rattus norvegicus ENSRNOG00000008159 I 0.000
ENSSHAG00000009700 Sarcophilus harrisii ENSSHAG00000009700 I 0.000
ENSSSCG00000005390 Sus scrofa ENSSSCG00000005390 I 0.000
ENSSTOG00000026763 Ictidomys tridecemlineatus ENSSTOG00000026763 I 0.000
MSANTD3 Taeniopygia guttata ENSTGUG00000008752 I 0.000
Aan_R010550 Calypte anna Aan_R010550 I 0.000
Afo_R015982 Aptenodytes forsteri Afo_R015982 I 0.000
Cmyd_10021233 Chelonia mydas Cmyd_10021233 I 0.000
ENSBTAP00000042141-D1 Bos grunniens ENSBTAP00000042141-D1 I 0.000
ENSP00000364022 Macaca fascicularis ENSP00000364022 I 0.000
Gfo_R006190 Geospiza fortis Gfo_R006190 I 0.000
Ogr12786 Ophisaurus gracilis Ogr12786 I 0.000
Pvit_18499 Pogona vitticeps Pvit_18499 I 0.000
Tal_R010083 Tyto alba Tal_R010083 I 0.000
msantd3 Xenopus tropicalis XB-GENE-5737820 I 0.000
msantd3.L Xenopus laevis XB-GENE-5737853 I 0.000
MSANTD3 Gallus gallus ENSGALG00000013403 I 0.000
ENSAMEG00000014972 Ailuropoda melanoleuca ENSAMEG00000014972 I 0.000
ENSAPLG00000013833 Anas platyrhynchos ENSAPLG00000013833 I 0.000
MSANTD3 Bos taurus ENSBTAG00000037580 I 0.000
MSANTD3-TMEFF1 Canis familiaris ENSCAFG00000002577 I 0.000
MSANTD3-TMEFF1 Callithrix jacchus ENSCJAG00000011484 I 0.000
ENSCSAG00000011159 Chlorocebus sabaeus ENSCSAG00000011159 I 0.000
MSANTD3 Dasypus novemcinctus ENSDNOG00000035872 I 0.000
MSANTD3 Equus caballus ENSECAG00000021233 I 0.000
ENSFALG00000004875 Ficedula albicollis ENSFALG00000004875 I 0.000
MSANTD3-TMEFF1 Felis catus ENSFCAG00000030912 I 0.000
MSANTD3 Anolis carolinensis ENSACAG00000025458 I 0.000
ENSGGOG00000026943 Gorilla gorilla ENSGGOG00000026943 I 0.000
MSANTD3 Loxodonta africana ENSLAFG00000031827 I 0.000
MSANTD3 Meleagris gallopavo ENSMGAG00000007604 I 0.000
MSANTD3 Myotis lucifugus ENSMLUG00000029223 I 0.000
MSANTD3-TMEFF1 Macaca mulatta ENSMMUG00000009775 I 0.000
MSANTD3 Monodelphis domestica ENSMODG00000012608 I 0.000
ENSMPUG00000006828 Mustela putorius furo ENSMPUG00000006828 I 0.000
Msantd3 Mus musculus ENSMUSG00000039693 I 0.000
ENSNLEG00000017101 Nomascus leucogenys ENSNLEG00000017101 I 0.000