Bo3g004970 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo3g004970 T267208_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SRM1
M02307_2.00 		Arabidopsis thaliana
NNHNATCNN
NNGATNDNN		 PBM
Weirauch et al.(2014)
pTH7080 		0.803 0.946
SRM1
M07121_2.00 		Arabidopsis thaliana
YCTTATCYWHW
WDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_colamp_a 		0.803 0.946
SRM1
M07122_2.00 		Arabidopsis thaliana
YCTTATCYWHWWH
DWWDWRGATAAGR		 Dap-seq
OMalley et al.(2016)
At5g08520_col_b 		0.803 0.946
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo3g004970.1 Myb 119 164

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g040190 Brassica oleracea Bo1g040190 N 0.000
Bo1g138670 Brassica oleracea Bo1g138670 N 0.000
Bo2g041500 Brassica oleracea Bo2g041500 N 0.000
Bo3g032880 Brassica oleracea Bo3g032880 N 0.000
Bo4g096780 Brassica oleracea Bo4g096780 N 0.000
Bo6g118420 Brassica oleracea Bo6g118420 N 0.000
Bo7g048200 Brassica oleracea Bo7g048200 N 0.000
Bo8g107410 Brassica oleracea Bo8g107410 N 0.000