Bo7g107420 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo7g107420 T267520_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK28187.1
M01286_2.00 		Cannabis sativa
TACCTACC
GGTAGGTA		 PBM
Lambert et al.(2019)
pTH11305 		0.853 0.925
AtMYB74
M07104_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB74_colamp_a 		0.826 0.903
AtMYB74
M07105_2.00 		Arabidopsis thaliana
BYHYACCTAMYHHH
DDDRKTAGGTRDRV		 Dap-seq
OMalley et al.(2016)
MYB74_col 		0.826 0.903
AtMYB41
M07109_2.00 		Arabidopsis thaliana
DHDBBYYACCTAMYW
WRKTAGGTRRVVHDH		 Dap-seq
OMalley et al.(2016)
MYB41_col_a 		0.776 0.882
MYB39
M07106_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHH
DDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_col_a 		0.720 0.720
MYB39
M07107_2.00 		Arabidopsis thaliana
NYYYACCWAMYWHHHHHHHNH
DNDDDDDDDWRKTWGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB39_colamp_a 		0.720 0.720
MYB107
M07061_2.00 		Arabidopsis thaliana
NDDWDBBYYACCWAMYHH
DDRKTWGGTRRVVHWHHN		 Dap-seq
OMalley et al.(2016)
MYB107_col_a 		0.673 0.785
MYB107
M07062_2.00 		Arabidopsis thaliana
WNBYYYACCWAMYH
DRKTWGGTRRRVNW		 Dap-seq
OMalley et al.(2016)
MYB107_colamp_a 		0.673 0.785
MYB49
M07140_2.00 		Arabidopsis thaliana
HDBBYYACCWAMYWH
DWRKTWGGTRRVVHD		 Dap-seq
OMalley et al.(2016)
MYB49_col_a 		0.670 0.806
MYB49
M07141_2.00 		Arabidopsis thaliana
NYYYACCTAMYWHN
NDWRKTAGGTRRRN		 Dap-seq
OMalley et al.(2016)
MYB49_colamp_a 		0.670 0.806
MYB92
M07123_2.00 		Arabidopsis thaliana
NHHACCTAMY
RKTAGGTDDN		 Dap-seq
OMalley et al.(2016)
MYB92_100ng20cy_b 		0.668 0.753
MYB92
M07124_2.00 		Arabidopsis thaliana
NNNNWNNYYYACCWAMYHH
DDRKTWGGTRRRNNWNNNN		 Dap-seq
OMalley et al.(2016)
MYB92_colamp_a 		0.668 0.753
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g107420.1 Myb 14 61
Bo7g107420.1 Myb 67 112

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

391 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
mgf021409m Mimulus guttatus mgf021409m I 0.000
OS05G0553400 Oryza sativa OS05G0553400 I 0.000
PGSC0003DMG400008532 Solanum tuberosum PGSC0003DMG400008532 I 0.000
PRUPE_ppa026975mg Prunus persica PRUPE_ppa026975mg I 0.000
Sb01g038250 Sorghum bicolor Sb01g038250 I 0.000
Sb09g027800 Sorghum bicolor Sb09g027800 I 0.000
Si002350m.g Setaria italica Si002350m.g I 0.000
Si022874m.g Setaria italica Si022874m.g I 0.000
Solyc03g059200.1 Solanum lycopersicum Solyc03g059200.1 I 0.000
Traes_4AS_4EFBA88E4 Triticum aestivum Traes_4AS_4EFBA88E4 I 0.000
Traes_4BL_532725AD5 Triticum aestivum Traes_4BL_532725AD5 I 0.000
Traes_4DL_DFCF4A15A Triticum aestivum Traes_4DL_DFCF4A15A I 0.000
Traes_7AL_5B57EF9FC Triticum aestivum Traes_7AL_5B57EF9FC I 0.000
Traes_7DL_20EC9096A Triticum aestivum Traes_7DL_20EC9096A I 0.000
VIT_17s0000g05400 Vitis vinifera VIT_17s0000g05400 I 0.000
mgf012871m Mimulus guttatus mgf012871m I 0.000
AMTR_s00133p00071910 Amborella trichopoda AMTR_s00133p00071910 I 0.000
Bostr.10199s0146 Boechera stricta Bostr.10199s0146 I 0.000
Cagra.3954s0035 Capsella grandiflora Cagra.3954s0035 I 0.000
Carubv10002949m.g Capsella rubella Carubv10002949m.g I 0.000
Ciclev10013340m.g Citrus clementina Ciclev10013340m.g I 0.000
Eucgr.I02017 Eucalyptus grandis Eucgr.I02017 I 0.000
evm.TU.contig_28309.2 Carica papaya evm.TU.contig_28309.2 I 0.000
orange1.1g043557m.g Citrus sinensis orange1.1g043557m.g I 0.000
Pavir.Db01456 Panicum virgatum Pavir.Db01456 I 0.000
Pavir.J11789 Panicum virgatum Pavir.J11789 I 0.000
Pavir.J15551 Panicum virgatum Pavir.J15551 I 0.000
Pavir.J34453 Panicum virgatum Pavir.J34453 I 0.000
SapurV1A.1048s0030 Salix purpurea SapurV1A.1048s0030 I 0.000
Thhalv10014063m.g Eutrema salsugineum Thhalv10014063m.g I 0.000
PK14382.1 Cannabis sativa PK14382.1 I 0.000
PDK_20s1379331g001 Phoenix dactylifera PDK_20s1379331g001 I 0.000
GSMUA_Achr3G10060_001 Musa acuminata GSMUA_Achr3G10060_001 I 0.000
F775_14388 Aegilops tauschii F775_14388 I 0.000
GLYMA13G04920 Glycine max GLYMA13G04920 I 0.000
GLYMA19G02090 Glycine max GLYMA19G02090 I 0.000
GRMZM2G006352 Zea mays GRMZM2G006352 I 0.000
GRMZM2G069325 Zea mays GRMZM2G069325 I 0.000
Bra020228 Brassica rapa Bra020228 I 0.000
Bra002448 Brassica rapa Bra002448 I 0.000
GRMZM2G308034 Zea mays GRMZM2G308034 I 0.000
Bo2g024590 Brassica oleracea Bo2g024590 I 0.000
LPERR05G20870 Leersia perrieri LPERR05G20870 I 0.000
MLOC_44167 Hordeum vulgare MLOC_44167 I 0.000
BGIOSGA017601 Oryza indica BGIOSGA017601 I 0.000
OB03G23760 Oryza brachyantha OB03G23760 I 0.000
ORUFI03G14500 Oryza rufipogon ORUFI03G14500 I 0.000
OBART03G13840 Oryza barthii OBART03G13840 I 0.000
OGLUM03G13980 Oryza glumaepatula OGLUM03G13980 I 0.000
OMERI03G12640 Oryza meridionalis OMERI03G12640 I 0.000
ONIVA03G15100 Oryza nivara ONIVA03G15100 I 0.000
ORGLA05G0216200 Oryza glaberrima ORGLA05G0216200 I 0.000
OPUNC03G13320 Oryza punctata OPUNC03G13320 I 0.000
ORGLA03G0133600 Oryza glaberrima ORGLA03G0133600 I 0.000
ORUFI05G26880 Oryza rufipogon ORUFI05G26880 I 0.000
RAX1 Arabidopsis thaliana AT5G23000 I 0.000
BGIOSGA010923 Oryza indica BGIOSGA010923 I 0.000
RAX1 Arabidopsis lyrata Al_scaffold_0006_2171 I 0.000
gene01311-v1.0-hybrid Fragaria vesca gene01311-v1.0-hybrid N 0.000
Lus10039462.g Linum usitatissimum Lus10039462.g N 0.000
MYB35 Arabidopsis thaliana AT3G28470 N 0.000
Bra025337 Brassica rapa Bra025337 N 0.000
BRADI2G17280 Brachypodium distachyon BRADI2G17280 N 0.000
Ciclev10023930m.g Citrus clementina Ciclev10023930m.g N 0.000
Gorai.010G139300 Gossypium raimondii Gorai.010G139300 N 0.000
Lus10005834.g Linum usitatissimum Lus10005834.g N 0.000
Lus10033119.g Linum usitatissimum Lus10033119.g N 0.000
Lus10036660.g Linum usitatissimum Lus10036660.g N 0.000
MDP0000258046 Malus domestica MDP0000258046 N 0.000
Thhalv10005502m.g Eutrema salsugineum Thhalv10005502m.g N 0.000
Bo7g091360 Brassica oleracea Bo7g091360 N 0.000
PDK_20s1406481g002 Phoenix dactylifera PDK_20s1406481g002 N 0.000
SapurV1A.0138s0120 Salix purpurea SapurV1A.0138s0120 N 0.000
Pm024633 Prunus mume Pm024633 N 0.000
POPTR_0012s07450 Populus trichocarpa POPTR_0012s07450 N 0.000
POPTR_0015s07900 Populus trichocarpa POPTR_0015s07900 N 0.000
ATMYB35 Populus trichocarpa POPTR_0017s11140 N 0.000
PRUPE_ppa015976mg Prunus persica PRUPE_ppa015976mg N 0.000
PRUPE_ppa017571mg Prunus persica PRUPE_ppa017571mg N 0.000
TCM_018082 Theobroma cacao TCM_018082 N 0.000
TCM_045715 Theobroma cacao TCM_045715 N 0.000
MTR_6g009430 Medicago truncatula MTR_6g009430 N 0.000
ATMYB35 Vitis vinifera VIT_14s0066g02180 N 0.000
Cla019436 Citrullus lanatus Cla019436 N 0.000
Pm015813 Prunus mume Pm015813 N 0.000
Carubv10017650m.g Capsella rubella Carubv10017650m.g N 0.000
cassava26191.m1 Manihot esculenta cassava26191.m1 N 0.000
cassava27944.m1 Manihot esculenta cassava27944.m1 N 0.000
cassava41279.m1 Manihot esculenta cassava41279.m1 N 0.000
Cucsa.197410 Cucumis sativus Cucsa.197410 N 0.000
Cucsa.339230 Cucumis sativus Cucsa.339230 N 0.000
estExt_Genewise1.C_360117 Physcomitrella patens estExt_Genewise1.C_360117 N 0.000
gw1.65.181.1 Physcomitrella patens gw1.65.181.1 N 0.000
Aquca_025_00152 Aquilegia coerulea Aquca_025_00152 N 0.000
Bostr.0556s0504 Boechera stricta Bostr.0556s0504 N 0.000
Cagra.2310s0015 Capsella grandiflora Cagra.2310s0015 N 0.000
ATMYB35 Arabidopsis lyrata fgenesh2_kg.5__614__AT3G28470.1 N 0.000