Bo9g134990 (Brassica oleracea)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Bo9g134990 T267629_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TRFL5
M02285_2.00 		Arabidopsis thaliana
WGCCCTAN
NTAGGGCW		 PBM
Weirauch et al.(2014)
pTH7099 		0.774 0.804
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g134990.1 Myb 391 440

Links

Other Myb/SANT family TFs
Other Brassica oleracea TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
maker-pir_contig_962-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_962-fgenesh-gene-0.0 N
estExt_fgenesh1_kg.C_00378 Phytophthora capsici estExt_fgenesh1_kg.C_00378 N
snap-piw_contig_1471-abinit-gene-0.10 Pythium iwayamai snap-piw_contig_1471-abinit-gene-0.10 N
PYU1_G005004 Pythium ultimum PYU1_G005004 N
PYU1_G004965 Pythium ultimum PYU1_G004965 N
PITG_05734 Phytophthora infestans PITG_05734 N
Physo132525 Phytophthora sojae Physo132525 N
Phyra75938 Phytophthora ramorum Phyra75938 N
Phyra75932 Phytophthora ramorum Phyra75932 N
maker-pve_contig_244-fgenesh-gene-0.5 Pythium vexans maker-pve_contig_244-fgenesh-gene-0.5 N
maker-pve_contig_244-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_244-fgenesh-gene-0.3 N
maker-piw_contig_1009-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_1009-fgenesh-gene-0.1 N
SPRG_01851 Saprolegnia parasitica SPRG_01851 N
maker-par_contig_498-fgenesh-gene-0.0 Pythium arrhenomanes maker-par_contig_498-fgenesh-gene-0.0 N
maker-pag1_scaffold_241-snap-gene-0.8 Pythium aphanidermatum maker-pag1_scaffold_241-snap-gene-0.8 N
maker-pag1_scaffold_241-snap-gene-0.5 Pythium aphanidermatum maker-pag1_scaffold_241-snap-gene-0.5 N
HpaG800546 Hyaloperonospora arabidopsidis HpaG800546 N
fgenesh_scip_prom.46568.2994 Phytophthora kernoviae fgenesh_scip_prom.46568.2994 N
fgenesh_scip_prom.46568.2990 Phytophthora kernoviae fgenesh_scip_prom.46568.2990 N
fgenesh_scip_prom.28083.8513 Phytophthora lateralis fgenesh_scip_prom.28083.8513 N
fgenesh_scip_prom.28083.7634 Phytophthora lateralis fgenesh_scip_prom.28083.7634 N
F443_02170 Phytophthora parasitica F443_02170 N
F443_00235 Phytophthora parasitica F443_00235 N