CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GSMUA_Achr3G07700_001 *(Musa acuminata)* Myb/SANT
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00249 (Myb_DNA-binding)	IPR014778	GSMUA_Achr3G07700_001	T272380_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
MYB52 M00871_2.00	Arabidopsis thaliana	NNNAMCNDNN	NNHNGKTNNN	PBM Franco-Zorrilla et al.(2014) MYB52	0.731	0.774
MYB52 M07007_2.00	Arabidopsis thaliana	TAACGGTNHHD	HDDNACCGTTA	Dap-seq OMalley et al.(2016) MYB52_col_a	0.731	0.774
MYB56 M07130_2.00	Arabidopsis thaliana	DDHNHTAACKGWHWH	DWDWCMGTTADNDHH	Dap-seq OMalley et al.(2016) MYB56_col_a	0.717	0.753
MYB56 M07131_2.00	Arabidopsis thaliana	DNNHTAACGGWHWHD	HDWDWCCGTTADNNH	Dap-seq OMalley et al.(2016) MYB56_colamp_a	0.717	0.753
MYB105 M07031_2.00	Arabidopsis thaliana	TAACGGTWWHDDW	WHHDWWACCGTTA	Dap-seq OMalley et al.(2016) MYB105_col_a	0.708	0.763
MYB105 M07032_2.00	Arabidopsis thaliana	NNDWHDHTAACGGWWWH	DWWWCCGTTADHDWHNN	Dap-seq OMalley et al.(2016) MYB105_colamp_a	0.708	0.763
PK07741.1 M01277_2.00	Cannabis sativa	HAMCBRHHN	NDDYVGKTD	PBM Lambert et al.(2019) pTH11469	0.662	0.624
For this family, TFs with SR scores > 0.661* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GSMUA_Achr3P07700_001	Myb	4	50	KDHWRPAEDAKLTELVAKYGPHNWNAIAEMLQGRSGKSCRLRWYNQL
GSMUA_Achr3P07700_001	Myb	56	101	KNPFTEEEDQLLLAAHQIYGNRWAIIARLFPGRTDNAVKNHWHVIM

Links
Other Myb/SANT family TFs
Other *Musa acuminata* TFs