ORGLA11G0056700 (Oryza glaberrima)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 ORGLA11G0056700 T276829_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB52
M00871_2.00 		Arabidopsis thaliana
NNNAMCNDNN
NNHNGKTNNN		 PBM
Franco-Zorrilla et al.(2014)
MYB52 		0.749 0.806
MYB52
M07007_2.00 		Arabidopsis thaliana
TAACGGTNHHD
HDDNACCGTTA		 Dap-seq
OMalley et al.(2016)
MYB52_col_a 		0.749 0.806
MYB56
M07130_2.00 		Arabidopsis thaliana
DDHNHTAACKGWHWH
DWDWCMGTTADNDHH		 Dap-seq
OMalley et al.(2016)
MYB56_col_a 		0.747 0.785
MYB56
M07131_2.00 		Arabidopsis thaliana
DNNHTAACGGWHWHD
HDWDWCCGTTADNNH		 Dap-seq
OMalley et al.(2016)
MYB56_colamp_a 		0.747 0.785
MYB105
M07031_2.00 		Arabidopsis thaliana
TAACGGTWWHDDW
WHHDWWACCGTTA		 Dap-seq
OMalley et al.(2016)
MYB105_col_a 		0.745 0.796
MYB105
M07032_2.00 		Arabidopsis thaliana
NNDWHDHTAACGGWWWH
DWWWCCGTTADHDWHNN		 Dap-seq
OMalley et al.(2016)
MYB105_colamp_a 		0.745 0.796
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA11G0056700.1 Myb 26 72
ORGLA11G0056700.1 Myb 78 123

Links

Other Myb/SANT family TFs
Other Oryza glaberrima TFs

386 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AIRE Homo sapiens ENSG00000160224 D 0.000
Aire Mus musculus ENSMUSG00000000731 D 0.000
ENSOARG00000011819 Ovis aries ENSOARG00000011819 I 0.000
Myotis_brandtii_Aire_10004050 Myotis brandtii Myotis_brandtii_Aire_10004050 I 0.000
ENSMMUP00000005576 Macaca fascicularis ENSMMUP00000005576 I 0.000
ENSBTAP00000031798-D1 Bos grunniens ENSBTAP00000031798-D1 I 0.000
AIRE Tursiops truncatus ENSTTRG00000010417 I 0.000
AIRE Tupaia belangeri ENSTBEG00000016828 I 0.000
ENSSTOG00000023870 Ictidomys tridecemlineatus ENSSTOG00000023870 I 0.000
Aire Rattus norvegicus ENSRNOG00000001213 I 0.000
AIRE Pteropus vampyrus ENSPVAG00000011010 I 0.000
AIRE Pan troglodytes ENSPTRG00000013974 I 0.000
ENSPPYG00000011482 Pongo abelii ENSPPYG00000011482 I 0.000
AIRE Procavia capensis ENSPCAG00000007455 I 0.000
ENSPANG00000020902 Papio anubis ENSPANG00000020902 I 0.000
AIRE Ochotona princeps ENSOPRG00000000050 I 0.000
AIRE Otolemur garnettii ENSOGAG00000010769 I 0.000
ENSAMEG00000010859 Ailuropoda melanoleuca ENSAMEG00000010859 I 0.000
ENSMPUG00000010031 Mustela putorius furo ENSMPUG00000010031 I 0.000
AIRE Macaca mulatta ENSMMUG00000004168 I 0.000
ENSMLUG00000010968 Myotis lucifugus ENSMLUG00000010968 I 0.000
AIRE Loxodonta africana ENSLAFG00000008582 I 0.000
AIRE Felis catus ENSFCAG00000007933 I 0.000
AIRE Equus caballus ENSECAG00000012924 I 0.000
Aire Dipodomys ordii ENSDORG00000004132 I 0.000
ENSCSAG00000007836 Chlorocebus sabaeus ENSCSAG00000007836 I 0.000
AIRE Cavia porcellus ENSCPOG00000019868 I 0.000
AIRE Canis familiaris ENSCAFG00000010724 I 0.000
AIRE Bos taurus ENSBTAG00000023393 I 0.000