CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400020013
(
Solanum tuberosum
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
PGSC0003DMG400020013
T277644_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400051513
Myb
6
53
KGAWSPEEDQKLIDYIMQYRIWNWSHMPKFAGLSRTGKSCRLRWINYL
PGSC0003DMT400051513
Myb
59
104
KGPFSIEEVEIVIRMYQSLGNRWSAIAKELPGRTDNEIKNFYHTHL
Links
Other
Myb/SANT
family TFs
Other
Solanum tuberosum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400008337
Solanum tuberosum
PGSC0003DMG400008337
N
0.718
PGSC0003DMG400020012
Solanum tuberosum
PGSC0003DMG400020012
N
0.877
PGSC0003DMG400027575
Solanum tuberosum
PGSC0003DMG400027575
N
0.708
PGSC0003DMG400042926
Solanum tuberosum
PGSC0003DMG400042926
N
0.755
Solyc03g093890.2
Solanum lycopersicum
Solyc03g093890.2
N
0.731
Solyc03g093930.2
Solanum lycopersicum
Solyc03g093930.2
N
0.755
Solyc03g093940.1
Solanum lycopersicum
Solyc03g093940.1
N
0.727
Solyc06g033870.1
Solanum lycopersicum
Solyc06g033870.1
N
0.767
Solyc06g034000.1
Solanum lycopersicum
Solyc06g034000.1
N
0.876
VIT_00s0203g00170
Vitis vinifera
VIT_00s0203g00170
N
0.672