Sb04g008670 (Sorghum bicolor)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 Sb04g008670 T279209_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT2G38300
M07056_2.00 		Arabidopsis thaliana
WAHATTCYHTH
DADRGAATDTW		 Dap-seq
OMalley et al.(2016)
AT2G38300_col_a 		0.832 0.915
PK26523.1
M01283_2.00 		Cannabis sativa
NWHATTCYNN
NNRGAATDWN		 PBM
Lambert et al.(2019)
pTH11304 		0.824 0.915
AT2G40260
M07057_2.00 		Arabidopsis thaliana
HHWDWAHATTCYHTN
NADRGAATDTWHWDD		 Dap-seq
OMalley et al.(2016)
AT2G40260_col_a 		0.803 0.851
AT2G40260
M07058_2.00 		Arabidopsis thaliana
NNDDWHHNDDWAHATTCYHT
ADRGAATDTWHHNDDWHHNN		 Dap-seq
OMalley et al.(2016)
AT2G40260_colamp_a 		0.803 0.851
PHL1
M02310_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7122 		0.711 0.702
PHL1
M07132_2.00 		Arabidopsis thaliana
MDRGAATATTCBNWN
NWNVGAATATTCYHK		 Dap-seq
OMalley et al.(2016)
At5g29000_col_a 		0.711 0.702
PHR1
M02302_2.00 		Arabidopsis thaliana
NWKATNCBNN
NNVGNATMWN		 PBM
Weirauch et al.(2014)
pTH7249 		0.681 0.702
AT1G14600
M01268_2.00 		Arabidopsis thaliana
NWAYATTCYN
NRGAATRTWN		 PBM
Lambert et al.(2019)
pTH11557 		0.673 0.787
PHL6
M02295_2.00 		Arabidopsis thaliana
NNWKATNCBN
NVGNATMWNN		 PBM
Weirauch et al.(2014)
pTH7071 		0.662 0.660
PHL6
M07083_2.00 		Arabidopsis thaliana
NDGAAAACH
DGTTTTCHN		 Dap-seq
OMalley et al.(2016)
At3g13040_col_b 		0.662 0.660
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb04g008670.1 Myb 122 173

Links

Other Myb/SANT family TFs
Other Sorghum bicolor TFs

438 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV06_06355 Exophiala oligosperma PV06_06355 N
Z519_08473 Cladophialophora bantiana Z519_08473 N
Z518_03126 Rhinocladiella mackenziei Z518_03126 N
Z518_00819 Rhinocladiella mackenziei Z518_00819 N
Z517_06419 Fonsecaea pedrosoi Z517_06419 N
PV10_04391 Exophiala mesophila PV10_04391 N
PV08_11643 Exophiala spinifera PV08_11643 N
PV08_08642 Exophiala spinifera PV08_08642 N
PV07_05309 Cladophialophora immunda PV07_05309 N
A1O1_06205 Capronia coronata A1O1_06205 N
PV05_06232 Exophiala xenobiotica PV05_06232 N
PV05_01571 Exophiala xenobiotica PV05_01571 N
PV04_04498 Capronia semiimmersa PV04_04498 N
HMPREF1120_03172 Exophiala dermatitidis HMPREF1120_03172 N
A1O9_09009 Exophiala aquamarina A1O9_09009 N
A1O7_04752 Cladophialophora yegresii A1O7_04752 N
A1O3_06928 Capronia epimyces A1O3_06928 N